6PZK Viral Protein date Aug 01, 2019
title Cryo-Em Structure Of The Respiratory Syncytial Virus Polymer Protein Bound By The Tetrameric Phosphoprotein (P)
authors M.S.A.Gilman, J.S.Mclellan
compound source
Molecule: Rna-Directed Rna Polymerase L
Chain: A
Synonym: Protein L,Large Structural Protein,Replicase,Trans
Ec: 2.7.7.48,2.1.1.56,2.7.7.-,2.7.7.88
Engineered: Yes
Organism_scientific: Human Respiratory Syncytial Virus A2
Organism_taxid: 11259
Strain: A2
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus

Molecule: Phosphoprotein
Chain: B, C, D, E
Synonym: Protein P
Engineered: Yes

Organism_scientific: Human Respiratory Syncytial Virus A2
Organism_taxid: 11259
Strain: A2
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.20 Å
ligand
enzyme Transferase E.C.2.7.7.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • RNA-directed 5'-3' RNA polym...
  • mRNA (guanine-N7-)-methyltra...


  • D, C, E, B
  • RNA-directed 5'-3' RNA polym...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (244 Kb) [Save to disk]
  • Biological Unit Coordinates (6pzk.pdb1.gz) 234 Kb
  • CSU: Contacts of Structural Units for 6PZK
  • Retrieve 6PZK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6PZK from S2C, [Save to disk]
  • View 6PZK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6PZK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6pzk_D] [6pzk_C] [6pzk_B] [6pzk_A] [6pzk_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6PZK
  • Community annotation for 6PZK at PDBWiki (http://pdbwiki.org)

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