6SOZ Protein Binding date Aug 30, 2019
title Glycosylated Trypanosoma Brucei Transferrin Receptor In Comp Human Transferrin
authors C.Trevor, M.Carrington, M.K.Higgins
compound source
Molecule: Esag6, Subunit Of Heterodimeric Transferrin Recep
Chain: A
Engineered: Yes
 Organism_scientific: Trypanosoma Brucei
Organism_taxid: 5691
Gene: 13j3.10
Expression_system: Cricetulus Longicaudatus
Expression_system_taxid: 10030

Molecule: Esag7, Subunit Of Heterodimeric Transferrin Recep
Chain: B
Engineered: Yes
Organism_scientific: Trypanosoma Brucei
Organism_taxid: 5691
Gene: 13j3.09
Expression_system: Cricetulus Longicaudatus
Expression_system_taxid: 10030

Molecule: Serotransferrin
Chain: C
Synonym: Transferrin,Beta-1 Metal-Binding Globulin,Sideroph
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tf, Pro1400
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.211 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
128.180 117.870 134.550 90.00 111.45 90.00
method X-Ray Diffractionresolution 3.42 Å
ligand FE, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


C
  • transferrin receptor binding...


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (445 Kb) [Save to disk]
  • Biological Unit Coordinates (6soz.pdb1.gz) 437 Kb
  • LPC: Ligand-Protein Contacts for 6SOZ
  • CSU: Contacts of Structural Units for 6SOZ
  • Structure Factors (861 Kb)
  • Retrieve 6SOZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6SOZ from S2C, [Save to disk]
    • View 6SOZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6SOZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6soz_C] [6soz_B] [6soz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6SOZ
  • Community annotation for 6SOZ at PDBWiki (http://pdbwiki.org)

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