6TGB Signaling Protein date Nov 15, 2019
title Cryoem Structure Of The Binary Dock2-Elmo1 Complex
authors L.Chang, J.Yang, J.H.Chang, Z.Zhang, A.Boland, S.H.Mclaughlin, A.A Thuraia, R.C.Killoran, M.J.Smith, J.F.Cote, D.Barford
compound source
Molecule: Dedicator Of Cytokinesis Protein 2
Chain: A, D
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dock2, Kiaa0209
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111

Molecule: Engulfment And Cell Motility Protein 1
Chain: B
Synonym: Protein Ced-12 Homolog
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Elmo1, Kiaa0281
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 5.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D
  • GTPase activator activity


    • B


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (363 Kb) [Save to disk]
  • Biological Unit Coordinates (6tgb.pdb1.gz) 339 Kb
  • CSU: Contacts of Structural Units for 6TGB
  • Retrieve 6TGB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TGB from S2C, [Save to disk]
    • View 6TGB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6TGB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6tgb_D] [6tgb_B] [6tgb_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6TGB
  • Community annotation for 6TGB at PDBWiki (http://pdbwiki.org)

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