6TX0 Crystal structure of tetrameric human D137N-SAMHD1 (residues 109-626) with XTP, dAMPNPP and Mg date
authors Morris, E.R., Kunzelmann, S., Caswell, S.J., Arnold, L.H., Purkiss, A.G., Kelly, G., Taylor, I.A.
compound source
symmetry
R_factor
R_Free 0.2281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.01
ligand CZF, DZ4, FE, MG enzyme
Primary referenceCrystal structures of SAMHD1 inhibitor complexes reveal the mechanism of water-mediated dNTP hydrolysis., Morris ER, Caswell SJ, Kunzelmann S, Arnold LH, Purkiss AG, Kelly G, Taylor IA, Nat Commun. 2020 Jun 23;11(1):3165. doi: 10.1038/s41467-020-16983-2. PMID:32576829
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (334 Kb) [Save to disk]
  • Biological Unit Coordinates (6tx0.pdb1.gz) 645 Kb
  • LPC: Ligand-Protein Contacts for 6TX0
  • CSU: Contacts of Structural Units for 6TX0
  • Structure Factors (2409 Kb)
  • Retrieve 6TX0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6TX0 from S2C, [Save to disk]
  • View 6TX0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6TX0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6tx0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6tx0_A] [6tx0_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6TX0
  • Community annotation for 6TX0 at PDBWiki (http://pdbwiki.org)

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