6U6T Cell Adhesion date Aug 30, 2019
title Neuronal Growth Regulator 1 (Negr1)
authors M.Machius, H.Venkannagari, A.Misra, G.Rudenko
compound source
Molecule: Neuronal Growth Regulator 1
Chain: A, B
Synonym: Iglon Family Member 4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Negr1, Iglon4, Unq2433pro4993
Expression_system: Baculovirus Expression Vector Pfastbac1-
Expression_system_taxid: 274590
Expression_system_plasmid: Pfastbac
symmetry Space Group: C 2 2 21
R_factor 0.234 R_Free 0.286
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.569 97.218 252.424 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.01 Å
ligand BMA, CA, FUC, NAG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (266 Kb) [Save to disk]
  • Biological Unit Coordinates (6u6t.pdb1.gz) 258 Kb
  • LPC: Ligand-Protein Contacts for 6U6T
  • CSU: Contacts of Structural Units for 6U6T
  • Structure Factors (446 Kb)
  • Retrieve 6U6T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6U6T from S2C, [Save to disk]
  • View 6U6T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6U6T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6u6t_B] [6u6t_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6U6T
  • Community annotation for 6U6T at PDBWiki (http://pdbwiki.org)

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