6UE6 Transferase date Sep 27, 2017
title Pwwp1 Domain Of Nsd2 In Complex With Mr837
authors Y.Liu, W.Tempel, R.F.De Freitas, M.Schapira, P.J.Brown, C.Bountra A.M.Edwards, C.H.Arrowsmith, J.Min, Structural Genomics Consor (Sgc)
compound source
Molecule: Histone-Lysine N-Methyltransferase Nsd2
Chain: A, B, C, D, E, F, G, H
Fragment: Unp Residues 211-350
Synonym: Multiple Myeloma Set Domain-Containing Protein, Mm Nuclear Set Domain-Containing Protein 2, Protein Trithorax- Hirschhorn Syndrome Candidate 1 Protein;
Ec: 2.1.1.43
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nsd2, Kiaa1090, Mmset, Trx5, Whsc1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: -V2r-Prare2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28-Mhl
symmetry Space Group: P 21 21 21
R_factor 0.235 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.210 70.320 228.830 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand Q5D, UNX enzyme Transferase E.C.2.1.1.43 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (307 Kb) [Save to disk]
  • Biological Unit Coordinates (6ue6.pdb1.gz) 43 Kb
  • Biological Unit Coordinates (6ue6.pdb2.gz) 41 Kb
  • Biological Unit Coordinates (6ue6.pdb3.gz) 36 Kb
  • Biological Unit Coordinates (6ue6.pdb4.gz) 40 Kb
  • Biological Unit Coordinates (6ue6.pdb5.gz) 42 Kb
  • Biological Unit Coordinates (6ue6.pdb6.gz) 38 Kb
  • Biological Unit Coordinates (6ue6.pdb7.gz) 40 Kb
  • Biological Unit Coordinates (6ue6.pdb8.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 6UE6
  • CSU: Contacts of Structural Units for 6UE6
  • Structure Factors (5053 Kb)
  • Retrieve 6UE6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6UE6 from S2C, [Save to disk]
    • View 6UE6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6UE6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ue6_C] [6ue6_F] [6ue6_H] [6ue6_A] [6ue6_B] [6ue6_E] [6ue6_D] [6ue6_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6UE6
  • Community annotation for 6UE6 at PDBWiki (http://pdbwiki.org)

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