6V7N Hydrolase date Dec 09, 2019
title Crystal Structure Of A Human Lysosome Resident Glycoprotein, Acid Lipase, And Its Implications In Cholesteryl Ester Stor Disease (Cesd)
authors S.Han
compound source
Molecule: Lysosomal Acid Lipasecholesteryl Ester Hydrolase
Chain: A, B
Synonym: Lal,Cholesteryl Esterase,Lipase A,Sterol Esterase
Ec: 3.1.1.13
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Lipa
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 2
R_factor 0.185 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.145 165.486 60.360 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.62 Å
ligand NAG, SO4 enzyme Hydrolase E.C.3.1.1.13 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal Structure of human Lysosomal Acid Lipase and its Implications in Cholesteryl Ester Storage Disease (CESD)., Rajamohan F, Reyes AR, Tu M, Nedoma NL, Hoth LR, Schwaid AG, Kurumbail RG, Ward J, Han S, J Lipid Res. 2020 Jun 1. pii: jlr.RA120000748. doi: 10.1194/jlr.RA120000748. PMID:32482718
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (259 Kb) [Save to disk]
  • Biological Unit Coordinates (6v7n.pdb1.gz) 127 Kb
  • Biological Unit Coordinates (6v7n.pdb2.gz) 129 Kb
  • LPC: Ligand-Protein Contacts for 6V7N
  • CSU: Contacts of Structural Units for 6V7N
  • Structure Factors (1019 Kb)
  • Retrieve 6V7N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6V7N from S2C, [Save to disk]
  • View 6V7N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6V7N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6v7n_A] [6v7n_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6V7N
  • Community annotation for 6V7N at PDBWiki (http://pdbwiki.org)

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