OCA Atlas for 6VIL

6VIL

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

M3L

enzyme

Primary reference

BAHCC1 binds H3K27me3 via a conserved BAH module to mediate gene silencing and oncogenesis., Fan H, Lu J, Guo Y, Li D, Zhang ZM, Tsai YH, Pi WC, Ahn JH, Gong W, Xiang Y, Allison DF, Geng H, He S, Diao Y, Chen WY, Strahl BD, Cai L, Song J, Wang GG, Nat Genet. 2020 Nov 2. pii: 10.1038/s41588-020-00729-3. doi:, 10.1038/s41588-020-00729-3. PMID:33139953

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (401 Kb) [Save to disk]

Biological Unit Coordinates (6vil.pdb1.gz) 53 Kb

Biological Unit Coordinates (6vil.pdb2.gz) 55 Kb

Biological Unit Coordinates (6vil.pdb3.gz) 55 Kb

Biological Unit Coordinates (6vil.pdb4.gz) 51 Kb

Biological Unit Coordinates (6vil.pdb5.gz) 51 Kb

Biological Unit Coordinates (6vil.pdb6.gz) 50 Kb

Biological Unit Coordinates (6vil.pdb7.gz) 53 Kb

Biological Unit Coordinates (6vil.pdb8.gz) 50 Kb

LPC: Ligand-Protein Contacts for 6VIL

CSU: Contacts of Structural Units for 6VIL

Structure Factors (1028 Kb)

Retrieve 6VIL in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 6VIL from S2C, [Save to disk]

View 6VIL in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6vil_A] [6vil_B] [6vil_C] [6vil_D] [6vil_E] [6vil_F] [6vil_G] [6vil_H] [6vil_I] [6vil_J] [6vil_L] [6vil_M]

SWISS-PROT database:

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