6WCZ Immune System date Mar 31, 2020
title Cryoem Structure Of Full-Length Zikv Ns5-Hstat2 Complex
authors W.Boxiao, T.Stephanie, Z.Kang, T.S.Maria, F.Jian, L.Jiuwei, G.Linf R.Wendan, C.Yanxiang, C.V.Ethan, H.Heajin, J.E.Matthew, E.O.Sean G.S.Adolfo, Z.Hong, H.Rong, S.Jikui
compound source
Molecule: Signal Transducer And Activator Of Transcription
Chain: A
Synonym: P113
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Stat2
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768

Molecule: Non-Structural Protein 5
Chain: B
Engineered: Yes

Organism_scientific: Zika Virus
Organism_common: Zikv
Organism_taxid: 64320
Gene: Gp1, A2g93_72125gpgp1, A2g93_72126gpgp1
Expression_system: Escherichia Coli 'Bl21-Gold(De3)Plyss Ag
Expression_system_taxid: 866768
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.00 Å
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for STAT2 suppression by flavivirus NS5., Wang B, Thurmond S, Zhou K, Sanchez-Aparicio MT, Fang J, Lu J, Gao L, Ren W, Cui Y, Veit EC, Hong H, Evans MJ, O'Leary SE, Garcia-Sastre A, Zhou ZH, Hai R, Song J, Nat Struct Mol Biol. 2020 Aug 10. pii: 10.1038/s41594-020-0472-y. doi:, 10.1038/s41594-020-0472-y. PMID:32778820
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (187 Kb) [Save to disk]
  • Biological Unit Coordinates (6wcz.pdb1.gz) 178 Kb
  • LPC: Ligand-Protein Contacts for 6WCZ
  • CSU: Contacts of Structural Units for 6WCZ
  • Retrieve 6WCZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6WCZ from S2C, [Save to disk]
  • View 6WCZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6WCZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6wcz_B] [6wcz_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6WCZ
  • Community annotation for 6WCZ at PDBWiki (http://pdbwiki.org)

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