6XT9	Protein Transport	date	Jan 15, 2020
title	Subunits Bbs 1,4,8,9,18 Of The Human Bbsome Complex
authors	B.U.Klink, S.Raunser, C.Gatsogiannis
compound		source
Molecule: Bardet-Biedl Syndrome 1 Protein Chain: A Synonym: Bbs2-Like Protein 2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bbs1, Bbs2l2 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: Hi5 Expression_system_vector_type: Acembl
Molecule: Bardet-Biedl Syndrome 4 Protein Chain: D Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bbs4 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: Hi5 Expression_system_vector_type: Acembl
Molecule: Tetratricopeptide Repeat Domain 8 Isoform 2 Chain: H Synonym: Tetratricopeptide Repeat Protein 8 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ttc8 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: Hi5 Expression_system_vector_type: Acembl
Molecule: Protein Pthb1 Chain: I Synonym: Bardet-Biedl Syndrome 9 Protein,Parathyroid Hormon Responsive B1 Gene Protein; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bbs9, Pthb1 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: Hi5 Expression_system_vector_type: Acembl
Molecule: Bbsome-Interacting Protein 1 Chain: J Synonym: Bbsome-Interacting Protein Of 10 Kda Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Bbip1, Bbip10, Ncrna00081 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: Hi5 Expression_system_vector_type: Acembl
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	3.80 Å
Gene Ontology	Chain Function Process Component A D maintenance of protein locat... H I J
Primary reference	Structure of the human BBSome core complex., Klink BU, Gatsogiannis C, Hofnagel O, Wittinghofer A, Raunser S, Elife. 2020 Jan 17;9. pii: 53910. doi: 10.7554/eLife.53910. PMID:31951201

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (314 Kb) [Save to disk] Biological Unit Coordinates (6xt9.pdb1.gz) 306 Kb CSU: Contacts of Structural Units for 6XT9 Retrieve 6XT9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6XT9 from S2C, [Save to disk]

View 6XT9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6XT9

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6xt9_J] [6xt9_A] [6xt9_I] [6xt9_H] [6xt9_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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Community annotation for 6XT9 at PDBWiki (http://pdbwiki.org)

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