6Y09	Protein Transport	date	Feb 07, 2020
title	Crystal Structure Of Atg16l In Complex With Gtp-Bound Rab33b
authors	S.Pantoom, Y.W.Wu
compound		source
Molecule: Ras-Related Protein Rab-33b Chain: A, B Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rab33b Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Popin
Molecule: Autophagy-Related Protein 16-1 Chain: C, D Synonym: Apg16-Like 1 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Atg16l1, Apg16l Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_vector_type: Plasmid Expression_system_plasmid: Prsf
symmetry	Space Group: P 21 21 21	R_factor 0.192 R_Free 0.231
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.950 132.420 155.130 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.40 Å
ligand	EDO, GTP, MG, PEG, PO4	enzyme
Primary reference	RAB33B recruits the ATG16L1 complex to the phagophore via a noncanonical RAB binding protein., Pantoom S, Konstantinidis G, Voss S, Han H, Hofnagel O, Li Z, Wu YW, Autophagy. 2020 Sep 22:1-15. doi: 10.1080/15548627.2020.1822629. PMID:32960676

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (195 Kb) [Save to disk] Biological Unit Coordinates (6y09.pdb1.gz) 185 Kb LPC: Ligand-Protein Contacts for 6Y09 CSU: Contacts of Structural Units for 6Y09 Structure Factors (953 Kb) Retrieve 6Y09 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6Y09 from S2C, [Save to disk]

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6y09_B] [6y09_C] [6y09_D] [6y09_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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