6YQ5 Viral Protein date Apr 16, 2020
title Hybrid Structure Of The Spp1 Tail Tube By Solid-State Nmr An - Nmr Ensemble
authors M.Zinke, K.A.A.Sachowsky, S.Zinn-Justin, R.Ravelli, G.F.Schroder M.Habeck, A.Lange
compound source
Molecule: Tail Tube Protein Gp17.1
Chain: A, B, C, D, E, F, G, H, I, J, K, L
Synonym: Ttp,Gene Product 17.1,Gp17.1,Major Tail Protein,Mt
Engineered: Yes
Organism_scientific: Bacillus Phage Spp1
Organism_taxid: 10724
Gene: 17.1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
methodElectron Microscopy; Solid-State NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (5179 Kb) [Save to disk]
  • Biological Unit Coordinates (6yq5.pdb1.gz) 507 Kb
  • CSU: Contacts of Structural Units for 6YQ5
  • Original NMR restraints for 6YQ5 from PDB
  • Retrieve 6YQ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6YQ5 from S2C, [Save to disk]
  • View 6YQ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6YQ5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6yq5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6yq5_J] [6yq5_L] [6yq5_E] [6yq5_F] [6yq5_B] [6yq5_I] [6yq5_D] [6yq5_C] [6yq5_H] [6yq5_K] [6yq5_G] [6yq5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6YQ5
  • Community annotation for 6YQ5 at PDBWiki (http://pdbwiki.org)

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