7A79 Dna Binding Protein date Aug 27, 2020
title Crystal Structure Of Rxr Gamma Lbd In Complexes With Palmiti Grip-1 Peptide
authors A.Chaikuad, D.Merk, S.Knapp, Structural Genomics Consortium (Sg
compound source
Molecule: Retinoic Acid Receptor Rxr-Gamma
Chain: A, B
Synonym: Nuclear Receptor Subfamily 2 Group B Member 3,Reti Receptor Gamma;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rxrg, Nr2b3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4

Molecule: Nuclear Receptor Coactivator 2
Chain: C, D
Synonym: Ncoa-2,Class E Basic Helix-Loop-Helix Protein 75,B Transcriptional Intermediary Factor 2,Htif2;
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 21
R_factor 0.195 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.246 67.051 110.700 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand PLM enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (154 Kb) [Save to disk]
  • Biological Unit Coordinates (7a79.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 7A79
  • CSU: Contacts of Structural Units for 7A79
  • Structure Factors (2050 Kb)
  • Retrieve 7A79 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7A79 from S2C, [Save to disk]
  • View 7A79 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7A79
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7a79_C] [7a79_A] [7a79_D] [7a79_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7A79
  • Community annotation for 7A79 at PDBWiki (http://pdbwiki.org)

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