7AUD Nuclear Protein date Nov 02, 2020
title Structure Of An Engineered Helicase Domain Construct For Hum Syndrome Protein (Blm)
authors X.Chen, A.W.Oliver
compound source
Molecule: Bloom Syndrome Protein,Bloom Syndrome Protein
Chain: A, B, C, D, E, F
Synonym: Dna Helicase,Recq-Like Type 2,Recq2,Recq Protein-L Helicase,Recq-Like Type 2,Recq2,Recq Protein-Like 3;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Blm, Recq2, Recql3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Dna (5'-D(Gptpapcpcpcpgpaptpgptpgpt)
Chain: M, N, O, P, Q, R
Engineered: Yes

Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 1
R_factor 0.229 R_Free 0.269
length a length b length c angle alpha angle beta angle gamma
84.916 111.709 132.344 72.64 80.18 79.22
method X-Ray Diffractionresolution 2.96 Å
ligand ADP, MG, PG4, RY8, ZN enzyme Hydrolase E.C. BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1089 Kb) [Save to disk]
  • Biological Unit Coordinates (7aud.pdb1.gz) 176 Kb
  • Biological Unit Coordinates (7aud.pdb2.gz) 185 Kb
  • Biological Unit Coordinates (7aud.pdb3.gz) 181 Kb
  • Biological Unit Coordinates (7aud.pdb4.gz) 182 Kb
  • Biological Unit Coordinates (7aud.pdb5.gz) 177 Kb
  • Biological Unit Coordinates (7aud.pdb6.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 7AUD
  • CSU: Contacts of Structural Units for 7AUD
  • Structure Factors (3369 Kb)
  • Retrieve 7AUD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7AUD from S2C, [Save to disk]
  • View 7AUD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7AUD
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 7aud from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7aud_E] [7aud_P] [7aud_C] [7aud_N] [7aud_M] [7aud_D] [7aud_R] [7aud_B] [7aud_O] [7aud_Q] [7aud_A] [7aud_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7AUD
  • Community annotation for 7AUD at PDBWiki (http://pdbwiki.org)

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