7CGP	Translocase	date	Jul 01, 2020
title	Cryo-Em Structure Of The Human Mitochondrial Translocase Tim At 3.7 Angstrom.
authors	L.Qi, Q.Wang, Z.Guan, C.Yan, P.Yin
compound		source
Molecule: Mitochondrial Import Inner Membrane Translocase S Tim22; Chain: A Synonym: Testis-Expressed Protein 4 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Timm22, Tex4, Tim22 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293
Molecule: Acylglycerol Kinase, Mitochondrial Chain: B Synonym: Hagk,Multiple Substrate Lipid Kinase,Multi-Substra Kinase; Ec: 2.7.1.107,2.7.1.138,2.7.1.94 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Agk, Mulk Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293
Molecule: Mitochondrial Import Inner Membrane Translocase S Tim29; Chain: C Synonym: Tim29 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Timm29, C19orf52 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293
Molecule: Mitochondrial Import Inner Membrane Translocase S Tim9; Chain: D, E, F, K, L Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Timm9, Tim9, Tim9a, Timm9a Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293
Molecule: Mitochondrial Import Inner Membrane Translocase S Tim10; Chain: G, H, I, M, N, O Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Timm10, Tim10 Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293
Molecule: Mitochondrial Import Inner Membrane Translocase S Tim10 B; Chain: J Synonym: Fracture Callus Protein 1,Fxc1,Mitochondrial Impor Membrane Translocase Subunit Tim9 B,Timm10b,Tim10b; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Timm10b, Fxc1, Tim9b, Timm9b Expression_system: Homo Sapiens Expression_system_common: Human Expression_system_taxid: 9606 Expression_system_cell_line: Hek293
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	3.70 Å
ligand	PEE	enzyme	Transferase E.C.2.7.1.107 BRENDA
Primary reference	Cryo-EM structure of the human mitochondrial translocase TIM22 complex., Qi L, Wang Q, Guan Z, Wu Y, Shen C, Hong S, Cao J, Zhang X, Yan C, Yin P, Cell Res. 2020 Sep 8. pii: 10.1038/s41422-020-00400-w. doi:, 10.1038/s41422-020-00400-w. PMID:32901109

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (233 Kb) [Save to disk] Biological Unit Coordinates (7cgp.pdb1.gz) 223 Kb LPC: Ligand-Protein Contacts for 7CGP CSU: Contacts of Structural Units for 7CGP Retrieve 7CGP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 7CGP from S2C, [Save to disk]

View 7CGP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 7CGP

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [7cgp_J] [7cgp_N] [7cgp_G] [7cgp_K] [7cgp_L] [7cgp_F] [7cgp_I] [7cgp_O] [7cgp_C] [7cgp_M] [7cgp_E] [7cgp_A] [7cgp_D] [7cgp_H] [7cgp_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 7CGP

Community annotation for 7CGP at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---