7JY8 Dna Binding Protein Dna date Aug 29, 2020
title Analysis Of A Strand Exchange Reaction With A Mini Filament 27-Mer Ssdna, Partially-Homologous 67 Bp Dsdna And Atpgamma
authors N.P.Pavletich
compound source
Molecule: Protein Reca
Chain: A, B, C, D, E, F, G, H, I
Synonym: Recombinase A
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Reca, Nctc11341_01072
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Dna (27-Mer)
Chain: S
Engineered: Yes

Synthetic: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562

Molecule: Dna (5'-D(Papapapapapapapapapa)-3')
Chain: T
Engineered: Yes

Synthetic: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 2.40 Å
ligand AGS, MG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1868 Kb) [Save to disk]
  • Biological Unit Coordinates (7jy8.pdb1.gz) 1861 Kb
  • LPC: Ligand-Protein Contacts for 7JY8
  • CSU: Contacts of Structural Units for 7JY8
  • Retrieve 7JY8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7JY8 from S2C, [Save to disk]
  • View 7JY8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 7JY8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7jy8_B] [7jy8_F] [7jy8_I] [7jy8_E] [7jy8_T] [7jy8_H] [7jy8_D] [7jy8_A] [7jy8_G] [7jy8_S] [7jy8_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 7JY8
  • Community annotation for 7JY8 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science