8GSS Human glutathione S-transferase P1-1, complex with glutathione date 1997-08-14
authors Oakley, A., Parker, M.
compound source
symmetry
R_factor
R_Free 0.2290000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand GSH, MES, SO4 enzyme
related structures by homologous chain: 13GS, 9GSS
Gene GTP (H. sapiens)
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • glutathione peroxidase activ...
  • protein binding


    • Primary referenceThe structures of human glutathione transferase P1-1 in complex with glutathione and various inhibitors at high resolution., Oakley AJ, Lo Bello M, Battistoni A, Ricci G, Rossjohn J, Villar HO, Parker MW, J Mol Biol 1997 Nov 21;274(1):84-100. PMID:9398518
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (8gss.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (8gss.pdb2.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 8GSS
  • CSU: Contacts of Structural Units for 8GSS
  • Likely Quarternary Molecular Structure file(s) for 8GSS
  • Structure Factors (529 Kb)
  • Retrieve 8GSS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 8GSS from S2C, [Save to disk]
  • Re-refined 8gss structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 8GSS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 8GSS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 8GSS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d8gssa2, region A:1-76 [Jmol] [rasmolscript] [script source]
        - Domain d8gssa1, region A:77-209 [Jmol] [rasmolscript] [script source]
        - Domain d8gssb2, region B:1-76 [Jmol] [rasmolscript] [script source]
        - Domain d8gssb1, region B:77-209 [Jmol] [rasmolscript] [script source]
        - Domain d8gssc2, region C:1-76 [Jmol] [rasmolscript] [script source]
        - Domain d8gssc1, region C:77-209 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [8gss_C] [8gss_A] [8gss] [8gss_B]
  • SWISS-PROT database: [P09211]
  • Domain organization of [GSTP1_HUMAN] by SWISSPFAM
    • Other resources with information on 8GSS
  • Community annotation for 8GSS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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