13GS GLUTATHIONE S-TRANSFERASE COMPLEXED WITH SULFASALAZINE date
authors Oakley, A.J., Bello, M.Lo., Parker, M.W.
compound source
symmetry
R_factor
R_Free 0.2220000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand GSH, MES, SAS enzyme
related structures by homologous chain: 2PGT, 8GSS
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • glutathione peroxidase activ...
  • protein binding


    • Primary referenceThe ligandin (non-substrate) binding site of human Pi class glutathione transferase is located in the electrophile binding site (H-site)., Oakley AJ, Lo Bello M, Nuccetelli M, Mazzetti AP, Parker MW, J Mol Biol 1999 Aug 27;291(4):913-26. PMID:10452896
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (13gs.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 13GS
  • CSU: Contacts of Structural Units for 13GS
  • Likely Quarternary Molecular Structure file(s) for 13GS
  • Structure Factors (302 Kb)
  • Retrieve 13GS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 13GS from S2C, [Save to disk]
  • Re-refined 13gs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 13GS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 13GS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 13GS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d13gsa2, region A:0-76 [Jmol] [rasmolscript] [script source]
        - Domain d13gsa1, region A:77-209 [Jmol] [rasmolscript] [script source]
        - Domain d13gsb2, region B:2-76 [Jmol] [rasmolscript] [script source]
        - Domain d13gsb1, region B:77-209 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [13gs_B] [13gs_A] [13gs_C] [13gs_D] [13gs]
  • SWISS-PROT database: [P09211]
  • Domain organization of [GSTP1_HUMAN] by SWISSPFAM
    • Other resources with information on 13GS
  • Community annotation for 13GS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science