8E4Y Membrane Protein date Aug 19, 2022
title Cryo-Em Structure Of Human Glycerol-3-Phosphate Acyltransfer (Gpat1) In Complex With 2-Oxohexadecyl-Coa
authors Z.L.Johnson, D.J.Wasilko, M.Ammirati, J.S.Chang, S.Han, H.Wu
compound source
Molecule: Glycerol-3-Phosphate Acyltransferase 1, Mitochond
Chain: A
Synonym: Gpat-1
Ec: 2.3.1.15
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gpam, Gpat1, Kiaa1560
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.40 Å
ligand NKO, UKL enzyme Transferase E.C.2.3.1.15 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (8e4y.pdb1.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 8E4Y
  • CSU: Contacts of Structural Units for 8E4Y
  • Retrieve 8E4Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 8E4Y from S2C, [Save to disk]
    • View 8E4Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 8E4Y
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [8e4y_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 8E4Y
  • Community annotation for 8E4Y at PDBWiki (http://pdbwiki.org)

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