9ATC Transferase date Jun 26, 1998
title Atcase Y165f Mutant
authors Y.Ha, N.M.Allewell
compound source
Molecule: Aspartate Transcarbamoylase
Chain: A
Ec: 2.1.3.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ek1104
Expression_system_plasmid: Pek33

Molecule: Aspartate Transcarbamoylase
Chain: B
Ec: 2.1.3.2
Engineered: Yes
Mutation: Yes

Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ek1104
Expression_system_plasmid: Pek33
symmetry Space Group: R 3 2
R_factor 0.252 R_Free 0.344
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.600 100.600 100.600 81.40 81.40 81.40
method X-Ray Diffractionresolution 2.40 Å
ligand ZN enzyme Transferase E.C.2.1.3.2 BRENDA
related structures by homologous chain: 1Q95, 1R0C, 8ATC
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceIntersubunit hydrogen bond acts as a global molecular switch in Escherichia coli aspartate transcarbamoylase., Ha Y, Allewell NM, Proteins 1998 Nov 15;33(3):430-43. PMID:9829701
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (9atc.pdb1.gz) 396 Kb
  • LPC: Ligand-Protein Contacts for 9ATC
  • CSU: Contacts of Structural Units for 9ATC
  • Likely Quarternary Molecular Structure file(s) for 9ATC
  • Retrieve 9ATC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 9ATC from S2C, [Save to disk]
  • View 9ATC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 9ATC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 9ATC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d9atca1, region A:1-150 [Jmol] [rasmolscript] [script source]
        - Domain d9atca2, region A:151-310 [Jmol] [rasmolscript] [script source]
        - Domain d9atcb2, region B:101-153 [Jmol] [rasmolscript] [script source]
        - Domain d9atcb1, region B:8-100 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [9atc_A] [9atc] [9atc_B]
  • SWISS-PROT database: [P0A786] [P0A7F3]
  • Domain organization of [PYRB_ECOLI] [PYRI_ECOLI] by SWISSPFAM
  • Other resources with information on 9ATC
  • Community annotation for 9ATC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 9ATC from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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