PDB Short entry for 3DEG HEADER RIBOSOME 10-JUN-08 3DEG TITLE COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)- TITLE 2 GMPPNP CAVEAT 3DEG THERE ARE SEVERAL CHIRALITY ERRORS IN CHAIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: A/L-TRNA; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: P-TRNA; COMPND 6 CHAIN: B; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: 30S RNA HELIX 8; COMPND 9 CHAIN: E; COMPND 10 MOL_ID: 4; COMPND 11 MOLECULE: 30S RNA HELIX 14; COMPND 12 CHAIN: F; COMPND 13 MOL_ID: 5; COMPND 14 MOLECULE: 50S RNA HELIX 42-44; COMPND 15 CHAIN: G; COMPND 16 MOL_ID: 6; COMPND 17 MOLECULE: 50S RNA HELIX 95; COMPND 18 CHAIN: I; COMPND 19 MOL_ID: 7; COMPND 20 MOLECULE: 50S RNA HELIX 71; COMPND 21 CHAIN: J; COMPND 22 MOL_ID: 8; COMPND 23 MOLECULE: 50S RNA HELIX 92; COMPND 24 CHAIN: K; COMPND 25 MOL_ID: 9; COMPND 26 MOLECULE: GTP-BINDING PROTEIN LEPA; COMPND 27 CHAIN: C; COMPND 28 FRAGMENT: EF4; COMPND 29 ENGINEERED: YES; COMPND 30 MOL_ID: 10; COMPND 31 MOLECULE: 30S RIBOSOMAL PROTEIN S12; COMPND 32 CHAIN: D; COMPND 33 MOL_ID: 11; COMPND 34 MOLECULE: 50S RIBOSOMAL PROTEIN L11; COMPND 35 CHAIN: H SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 6 ORGANISM_TAXID: 562; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 9 ORGANISM_TAXID: 562; SOURCE 10 MOL_ID: 4; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 562; SOURCE 13 MOL_ID: 5; SOURCE 14 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 15 ORGANISM_TAXID: 562; SOURCE 16 MOL_ID: 6; SOURCE 17 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 18 ORGANISM_TAXID: 562; SOURCE 19 MOL_ID: 7; SOURCE 20 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 21 ORGANISM_TAXID: 562; SOURCE 22 MOL_ID: 8; SOURCE 23 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 24 ORGANISM_TAXID: 562; SOURCE 25 MOL_ID: 9; SOURCE 26 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 27 ORGANISM_TAXID: 83333; SOURCE 28 STRAIN: K12; SOURCE 29 GENE: LEPA, B2569, JW2553; SOURCE 30 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 32 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 33 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 34 EXPRESSION_SYSTEM_PLASMID: PET14B; SOURCE 35 MOL_ID: 10; SOURCE 36 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 37 ORGANISM_TAXID: 83333; SOURCE 38 STRAIN: K12; SOURCE 39 MOL_ID: 11; SOURCE 40 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 41 ORGANISM_TAXID: 83333; SOURCE 42 STRAIN: K12 KEYWDS RIBOSOME, TRANSLATION, LEPA, EF4, GTP-BINDING, MEMBRANE, NUCLEOTIDE- KEYWDS 2 BINDING, ANTIBIOTIC RESISTANCE, RIBONUCLEOPROTEIN, RIBOSOMAL KEYWDS 3 PROTEIN, RNA-BINDING, RRNA-BINDING, TRNA-BINDING, METHYLATION EXPDTA ELECTRON MICROSCOPY AUTHOR S.R.CONNELL,M.TOPF,Y.QIN,D.N.WILSON,T.MIELKE,P.FUCINI,K.H.NIERHAUS, AUTHOR 2 C.M.T.SPAHN REVDAT 7 20-MAR-24 3DEG 1 REMARK LINK REVDAT 6 11-DEC-19 3DEG 1 REMARK LINK REVDAT 5 16-APR-14 3DEG 1 JRNL REVDAT 4 30-MAY-12 3DEG 1 REMARK REVDAT 3 13-JUL-11 3DEG 1 VERSN REVDAT 2 24-FEB-09 3DEG 1 VERSN REVDAT 1 19-AUG-08 3DEG 0 JRNL AUTH S.R.CONNELL,M.TOPF,Y.QIN,D.N.WILSON,T.MIELKE,P.FUCINI, JRNL AUTH 2 K.H.NIERHAUS,C.M.T.SPAHN JRNL TITL A NEW TRNA INTERMEDIATE REVEALED ON THE RIBOSOME DURING JRNL TITL 2 EF4-MEDIATED BACK-TRANSLOCATION JRNL REF NAT.STRUCT.MOL.BIOL. V. 15 910 2008 JRNL REFN ISSN 1545-9993 JRNL PMID 19172743 JRNL DOI 10.1038/NSMB.1469 REMARK 2 REMARK 2 RESOLUTION. 10.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : FLEX-EM, MOD-EM, SITUS, SPIDER REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 2I2P REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : REFINEMENT PROTOCOL--RIGID BODY AND FLEXIBLE REMARK 3 FITTING REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 10.90 REMARK 3 NUMBER OF PARTICLES : 41294 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 3DEG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ. REMARK 100 THE DEPOSITION ID IS D_1000047936. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COMPLEX OF ELONGATING REMARK 245 ESCHERICHIA COLI 70S RIBOSOME REMARK 245 AND EF4(LEPA)-GMPPNP REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : NULL REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI POLARA 300 REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3900.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 39000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: UNDECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F, G, I, J, K, C, D, REMARK 350 AND CHAINS: H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C1' 2MG A 10 ND2 ASN C 394 0.38 REMARK 500 OP1 C A 11 CA THR C 534 0.47 REMARK 500 CD GLN C 294 CZ TYR C 470 0.68 REMARK 500 NE2 GLN C 294 CE2 TYR C 470 0.68 REMARK 500 C5' A I 2660 CG ARG C 463 0.75 REMARK 500 OP2 U A 69 O ARG C 539 0.77 REMARK 500 O5' A I 2660 CG ARG C 463 0.77 REMARK 500 O PRO C 368 CD2 LEU C 452 0.82 REMARK 500 OP2 C A 11 CB THR C 534 0.85 REMARK 500 CB TYR C 434 OE1 GLN H 29 0.89 REMARK 500 C4' A A 76 C5 U J 1944 0.89 REMARK 500 CB PRO C 328 CB HIS D 76 0.89 REMARK 500 O4' A I 2660 CA ARG C 463 0.91 REMARK 500 NE2 GLN C 294 CZ TYR C 470 0.91 REMARK 500 P U A 69 C ARG C 539 0.94 REMARK 500 C4' A A 76 C4 U J 1944 0.95 REMARK 500 CB PRO C 328 CG HIS D 76 1.01 REMARK 500 CD1 LEU C 345 CB ASP C 456 1.04 REMARK 500 CD2 LEU C 345 OD1 ASP C 453 1.05 REMARK 500 OP2 C A 11 OG1 THR C 534 1.07 REMARK 500 OP1 U A 69 N SER C 540 1.07 REMARK 500 C4 C A 75 C6 U J 1944 1.09 REMARK 500 CD GLN C 294 OH TYR C 470 1.09 REMARK 500 OP2 A I 2660 NE ARG C 463 1.10 REMARK 500 P C A 11 CB THR C 534 1.12 REMARK 500 C5' A I 2660 CB ARG C 463 1.12 REMARK 500 C5 A A 76 O2 U J 1944 1.12 REMARK 500 C3' A A 76 O4 U J 1944 1.13 REMARK 500 CG PRO C 328 CB HIS D 76 1.13 REMARK 500 P C A 11 OG1 THR C 534 1.14 REMARK 500 O3' U A 68 CA ARG C 539 1.14 REMARK 500 CB LEU C 345 OD1 ASP C 456 1.17 REMARK 500 P C A 70 CG2 THR C 541 1.20 REMARK 500 C2' 2MG A 10 ND2 ASN C 394 1.25 REMARK 500 N3 A A 76 O2' U J 1944 1.26 REMARK 500 CG TYR C 434 OE1 GLN H 29 1.27 REMARK 500 C3' A A 76 C4 U J 1944 1.29 REMARK 500 P U A 69 O ARG C 539 1.31 REMARK 500 CD1 LEU C 345 CG ASP C 456 1.32 REMARK 500 CD2 LEU C 345 CG ASP C 453 1.33 REMARK 500 OP1 C A 70 CG2 THR C 541 1.36 REMARK 500 C PRO C 328 CD2 HIS D 76 1.36 REMARK 500 O3' U A 68 CB ARG C 539 1.37 REMARK 500 C PRO C 368 CD2 LEU C 452 1.39 REMARK 500 O3' A A 76 O4 U J 1944 1.40 REMARK 500 N7 A I 2660 CA SER C 460 1.41 REMARK 500 O5' A I 2660 CD ARG C 463 1.41 REMARK 500 O4' 2MG A 10 ND2 ASN C 394 1.41 REMARK 500 OP1 A I 2662 NH2 ARG C 50 1.41 REMARK 500 OP2 U A 69 C ARG C 539 1.42 REMARK 500 REMARK 500 THIS ENTRY HAS 206 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 G A 1 P G A 1 OP3 -0.086 REMARK 500 C A 25 O3' M2G A 26 P -0.159 REMARK 500 U A 33 O3' OMG A 34 P -0.288 REMARK 500 OMG A 34 O3' A A 35 P 0.237 REMARK 500 C B 1 P C B 1 OP3 -0.084 REMARK 500 U G1060 C2 U G1060 N3 0.054 REMARK 500 A G1086 N3 A G1086 C4 -0.044 REMARK 500 A G1086 C5 A G1086 C6 -0.147 REMARK 500 A G1086 C5 A G1086 N7 -0.037 REMARK 500 A G1088 C6 A G1088 N1 -0.074 REMARK 500 ASP C 14 CA ASP C 14 CB 0.169 REMARK 500 ASP C 14 CB ASP C 14 CG 0.135 REMARK 500 MET C 480 C VAL C 481 N 0.199 REMARK 500 PRO H 73 N PRO H 73 CA 0.102 REMARK 500 PRO H 73 CA PRO H 73 C 0.148 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G A 18 C5' - C4' - O4' ANGL. DEV. = -10.1 DEGREES REMARK 500 C A 25 C3' - O3' - P ANGL. DEV. = -42.4 DEGREES REMARK 500 M2G A 26 O3' - P - O5' ANGL. DEV. = -29.3 DEGREES REMARK 500 M2G A 26 O3' - P - OP2 ANGL. DEV. = -46.5 DEGREES REMARK 500 M2G A 26 O3' - P - OP1 ANGL. DEV. = 66.6 DEGREES REMARK 500 U A 33 C3' - O3' - P ANGL. DEV. = 16.5 DEGREES REMARK 500 OMG A 34 O3' - P - O5' ANGL. DEV. = -15.2 DEGREES REMARK 500 OMG A 34 O3' - P - OP2 ANGL. DEV. = 6.8 DEGREES REMARK 500 A A 35 O3' - P - O5' ANGL. DEV. = 37.5 DEGREES REMARK 500 A A 35 O3' - P - OP2 ANGL. DEV. = -22.3 DEGREES REMARK 500 A A 35 C3' - O3' - P ANGL. DEV. = 49.3 DEGREES REMARK 500 A A 36 O3' - P - O5' ANGL. DEV. = -16.9 DEGREES REMARK 500 A A 36 O3' - P - OP1 ANGL. DEV. = 20.1 DEGREES REMARK 500 U G1060 C5 - C4 - O4 ANGL. DEV. = -4.4 DEGREES REMARK 500 A G1086 C4 - C5 - C6 ANGL. DEV. = 3.5 DEGREES REMARK 500 A G1086 C6 - C5 - N7 ANGL. DEV. = -4.3 DEGREES REMARK 500 A G1088 N1 - C6 - N6 ANGL. DEV. = -5.1 DEGREES REMARK 500 A G1088 C5 - C6 - N6 ANGL. DEV. = 5.2 DEGREES REMARK 500 HIS C 12 O - C - N ANGL. DEV. = -11.1 DEGREES REMARK 500 ILE C 13 CA - CB - CG2 ANGL. DEV. = 12.8 DEGREES REMARK 500 ILE C 13 N - CA - C ANGL. DEV. = 33.3 DEGREES REMARK 500 ASP C 14 C - N - CA ANGL. DEV. = -42.6 DEGREES REMARK 500 ASP C 14 CB - CA - C ANGL. DEV. = 35.2 DEGREES REMARK 500 ASP C 14 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 HIS C 15 C - N - CA ANGL. DEV. = 18.3 DEGREES REMARK 500 HIS C 15 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 LYS C 17 CB - CA - C ANGL. DEV. = -22.0 DEGREES REMARK 500 LYS C 17 N - CA - CB ANGL. DEV. = 11.8 DEGREES REMARK 500 LEU C 20 C - N - CA ANGL. DEV. = -18.2 DEGREES REMARK 500 ILE C 54 CA - CB - CG1 ANGL. DEV. = 15.8 DEGREES REMARK 500 ILE C 54 CA - CB - CG2 ANGL. DEV. = -12.3 DEGREES REMARK 500 LYS C 55 O - C - N ANGL. DEV. = -10.1 DEGREES REMARK 500 ALA C 56 CB - CA - C ANGL. DEV. = -10.9 DEGREES REMARK 500 ALA C 56 N - CA - CB ANGL. DEV. = 9.2 DEGREES REMARK 500 LYS C 292 C - N - CA ANGL. DEV. = 17.5 DEGREES REMARK 500 PRO C 293 C - N - CD ANGL. DEV. = -16.3 DEGREES REMARK 500 GLN C 294 N - CA - CB ANGL. DEV. = -11.1 DEGREES REMARK 500 THR C 366 N - CA - C ANGL. DEV. = -18.6 DEGREES REMARK 500 ALA C 367 CA - C - N ANGL. DEV. = 17.1 DEGREES REMARK 500 ALA C 367 O - C - N ANGL. DEV. = -12.5 DEGREES REMARK 500 PRO C 368 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 PRO C 368 C - N - CD ANGL. DEV. = -20.9 DEGREES REMARK 500 TYR C 372 CA - C - N ANGL. DEV. = 14.7 DEGREES REMARK 500 TYR C 372 O - C - N ANGL. DEV. = -18.3 DEGREES REMARK 500 GLU C 373 C - N - CA ANGL. DEV. = 22.8 DEGREES REMARK 500 GLN C 476 O - C - N ANGL. DEV. = -17.9 DEGREES REMARK 500 VAL C 481 CA - CB - CG1 ANGL. DEV. = -9.2 DEGREES REMARK 500 VAL C 483 CB - CA - C ANGL. DEV. = -11.6 DEGREES REMARK 500 VAL C 483 CA - CB - CG1 ANGL. DEV. = -9.5 DEGREES REMARK 500 ASN C 488 CB - CA - C ANGL. DEV. = -15.9 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 57 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE C 13 -83.44 -97.18 REMARK 500 CYS C 28 -118.85 -110.94 REMARK 500 SER C 32 -118.64 -122.97 REMARK 500 ALA C 56 -164.00 -117.39 REMARK 500 SER C 58 152.64 87.84 REMARK 500 PHE C 84 38.49 -98.81 REMARK 500 ASN C 202 -6.86 -59.82 REMARK 500 LYS C 263 -71.75 -50.47 REMARK 500 VAL C 291 150.55 75.17 REMARK 500 GLN C 294 -73.99 -76.36 REMARK 500 ARG C 357 -60.89 -94.06 REMARK 500 ASN C 437 32.20 -90.89 REMARK 500 ASP C 453 106.37 -32.46 REMARK 500 ASN C 488 68.05 -33.86 REMARK 500 GLN C 522 -141.32 -118.98 REMARK 500 ARG D 11 161.36 -49.27 REMARK 500 VAL D 15 108.00 -44.67 REMARK 500 ASN D 19 13.88 -62.86 REMARK 500 ALA D 22 46.11 -70.08 REMARK 500 ALA D 25 -20.33 67.38 REMARK 500 ARG D 30 -165.67 -69.81 REMARK 500 VAL D 32 -31.78 -147.14 REMARK 500 CYS D 33 83.63 70.45 REMARK 500 ARG D 35 155.19 176.29 REMARK 500 PRO D 41 -169.93 -69.91 REMARK 500 LYS D 42 -112.15 -65.15 REMARK 500 SER D 46 -153.46 -144.88 REMARK 500 ALA D 47 135.06 64.62 REMARK 500 HIS D 71 144.86 -174.71 REMARK 500 GLN D 74 -118.32 -94.89 REMARK 500 GLU D 75 -71.44 -120.34 REMARK 500 VAL D 92 95.36 -53.58 REMARK 500 LEU D 101 -95.79 63.89 REMARK 500 LYS D 110 50.58 -96.53 REMARK 500 GLN D 111 123.02 -173.84 REMARK 500 TYR D 116 -109.87 54.53 REMARK 500 ARG D 120 141.40 56.92 REMARK 500 LYS D 122 0.00 -165.05 REMARK 500 LYS H 2 -97.36 -100.12 REMARK 500 ALA H 14 -84.00 -57.40 REMARK 500 MET H 16 132.99 177.62 REMARK 500 ASN H 18 -16.20 100.06 REMARK 500 VAL H 23 -118.58 -109.01 REMARK 500 GLU H 49 131.58 176.27 REMARK 500 ARG H 64 12.89 45.56 REMARK 500 LYS H 71 -135.52 -129.45 REMARK 500 PRO H 73 -167.95 -123.39 REMARK 500 PRO H 74 -162.20 -105.87 REMARK 500 ALA H 75 -68.35 -139.62 REMARK 500 ALA H 76 -43.37 -24.83 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS C 12 ILE C 13 -123.83 REMARK 500 ILE C 13 ASP C 14 45.56 REMARK 500 SER C 18 THR C 19 136.23 REMARK 500 VAL C 291 LYS C 292 -147.16 REMARK 500 ILE C 487 ASN C 488 -112.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 G A 18 0.05 SIDE CHAIN REMARK 500 G A 19 0.06 SIDE CHAIN REMARK 500 A A 62 0.05 SIDE CHAIN REMARK 500 G B 4 0.06 SIDE CHAIN REMARK 500 C B 25 0.06 SIDE CHAIN REMARK 500 U G1060 0.15 SIDE CHAIN REMARK 500 A G1086 0.08 SIDE CHAIN REMARK 500 A G1088 0.14 SIDE CHAIN REMARK 500 A G1111 0.06 SIDE CHAIN REMARK 500 ARG C 482 0.34 SIDE CHAIN REMARK 500 ARG C 491 0.23 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 HIS C 12 -12.95 REMARK 500 GLY C 29 -14.58 REMARK 500 LYS C 289 -15.03 REMARK 500 GLN C 476 -23.41 REMARK 500 THR H 70 -13.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-1524 RELATED DB: EMDB REMARK 900 COMPLEX OF ELONGATING ESCHERICHIA COLI 70S RIBOSOME AND EF4(LEPA)- REMARK 900 GMPPNP DBREF 3DEG A 1 76 PDB 3DEG 3DEG 1 76 DBREF 3DEG B 1 76 PDB 3DEG 3DEG 1 76 DBREF 3DEG G 1043 1112 PDB 3DEG 3DEG 1043 1112 DBREF 3DEG I 2646 2674 PDB 3DEG 3DEG 2646 2674 DBREF 3DEG J 1944 1961 PDB 3DEG 3DEG 1944 1961 DBREF 3DEG C 1 545 PDB 3DEG 3DEG 1 545 DBREF 3DEG D 1 123 PDB 3DEG 3DEG 1 123 DBREF 3DEG H 1 141 PDB 3DEG 3DEG 1 141 DBREF 3DEG C 1 545 UNP P60785 LEPA_ECOLI 1 545 DBREF 3DEG D 1 123 UNP P0A7S3 RS12_ECOLI 2 124 DBREF 3DEG H 1 141 UNP P0A7J7 RL11_ECOLI 2 142 DBREF 3DEG E 153 168 PDB 3DEG 3DEG 153 168 DBREF 3DEG F 339 350 PDB 3DEG 3DEG 339 350 DBREF 3DEG K 2547 2561 PDB 3DEG 3DEG 2547 2561 SEQRES 1 A 76 G C G G A U U U A 2MG C U C SEQRES 2 A 76 A G H2U H2U G G G A G A G C M2G SEQRES 3 A 76 C C A G A OMC U OMG A A YG A PSU SEQRES 4 A 76 5MC U G G A G 7MG U C 5MC U G U SEQRES 5 A 76 G 5MU PSU C G 1MA U C C A C A G SEQRES 6 A 76 A A U U C G C A C C A SEQRES 1 B 77 C G C G G G G U G G A G C SEQRES 2 B 77 A G C C U G G U A G C U C SEQRES 3 B 77 G U C G G G C U C A U A A SEQRES 4 B 77 C C C G A A G G U C G U C SEQRES 5 B 77 G G 5MU U C A A A U C C G G SEQRES 6 B 77 C C C C C G C A A C C A SEQRES 1 E 16 C U A C U G G A A A C G G SEQRES 2 E 16 U A G SEQRES 1 F 12 C U C C U A C G G G A G SEQRES 1 G 70 C C C A G A C A G C C A G SEQRES 2 G 70 G A U G U U G G C U U A G SEQRES 3 G 70 A A G C A G C C A U C A U SEQRES 4 G 70 U U A A A G A A A G C G U SEQRES 5 G 70 A A U A G C U C A C U G G SEQRES 6 G 70 U C G A G SEQRES 1 I 29 C U G C U C C U A G U A C SEQRES 2 I 29 G A G A G G A C C G G A G SEQRES 3 I 29 U G G SEQRES 1 J 18 U G U C G G G U A A G U U SEQRES 2 J 18 C C G A C SEQRES 1 K 15 A U G G C U G U U C G C C SEQRES 2 K 15 A U SEQRES 1 C 545 MET LYS ASN ILE ARG ASN PHE SER ILE ILE ALA HIS ILE SEQRES 2 C 545 ASP HIS GLY LYS SER THR LEU SER ASP ARG ILE ILE GLN SEQRES 3 C 545 ILE CYS GLY GLY LEU SER ASP ARG GLU MET GLU ALA GLN SEQRES 4 C 545 VAL LEU ASP SER MET ASP LEU GLU ARG GLU ARG GLY ILE SEQRES 5 C 545 THR ILE LYS ALA GLN SER VAL THR LEU ASP TYR LYS ALA SEQRES 6 C 545 SER ASP GLY GLU THR TYR GLN LEU ASN PHE ILE ASP THR SEQRES 7 C 545 PRO GLY HIS VAL ASP PHE SER TYR GLU VAL SER ARG SER SEQRES 8 C 545 LEU ALA ALA CYS GLU GLY ALA LEU LEU VAL VAL ASP ALA SEQRES 9 C 545 GLY GLN GLY VAL GLU ALA GLN THR LEU ALA ASN CYS TYR SEQRES 10 C 545 THR ALA MET GLU MET ASP LEU GLU VAL VAL PRO VAL LEU SEQRES 11 C 545 ASN LYS ILE ASP LEU PRO ALA ALA ASP PRO GLU ARG VAL SEQRES 12 C 545 ALA GLU GLU ILE GLU ASP ILE VAL GLY ILE ASP ALA THR SEQRES 13 C 545 ASP ALA VAL ARG CYS SER ALA LYS THR GLY VAL GLY VAL SEQRES 14 C 545 GLN ASP VAL LEU GLU ARG LEU VAL ARG ASP ILE PRO PRO SEQRES 15 C 545 PRO GLU GLY ASP PRO GLU GLY PRO LEU GLN ALA LEU ILE SEQRES 16 C 545 ILE ASP SER TRP PHE ASP ASN TYR LEU GLY VAL VAL SER SEQRES 17 C 545 LEU ILE ARG ILE LYS ASN GLY THR LEU ARG LYS GLY ASP SEQRES 18 C 545 LYS VAL LYS VAL MET SER THR GLY GLN THR TYR ASN ALA SEQRES 19 C 545 ASP ARG LEU GLY ILE PHE THR PRO LYS GLN VAL ASP ARG SEQRES 20 C 545 THR GLU LEU LYS CYS GLY GLU VAL GLY TRP LEU VAL CYS SEQRES 21 C 545 ALA ILE LYS ASP ILE HIS GLY ALA PRO VAL GLY ASP THR SEQRES 22 C 545 LEU THR LEU ALA ARG ASN PRO ALA GLU LYS ALA LEU PRO SEQRES 23 C 545 GLY PHE LYS LYS VAL LYS PRO GLN VAL TYR ALA GLY LEU SEQRES 24 C 545 PHE PRO VAL SER SER ASP ASP TYR GLU ALA PHE ARG ASP SEQRES 25 C 545 ALA LEU GLY LYS LEU SER LEU ASN ASP ALA SER LEU PHE SEQRES 26 C 545 TYR GLU PRO GLU SER SER SER ALA LEU GLY PHE GLY PHE SEQRES 27 C 545 ARG CYS GLY PHE LEU GLY LEU LEU HIS MET GLU ILE ILE SEQRES 28 C 545 GLN GLU ARG LEU GLU ARG GLU TYR ASP LEU ASP LEU ILE SEQRES 29 C 545 THR THR ALA PRO THR VAL VAL TYR GLU VAL GLU THR THR SEQRES 30 C 545 SER ARG GLU VAL ILE TYR VAL ASP SER PRO SER LYS LEU SEQRES 31 C 545 PRO ALA VAL ASN ASN ILE TYR GLU LEU ARG GLU PRO ILE SEQRES 32 C 545 ALA GLU CYS HIS MET LEU LEU PRO GLN ALA TYR LEU GLY SEQRES 33 C 545 ASN VAL ILE THR LEU CYS VAL GLU LYS ARG GLY VAL GLN SEQRES 34 C 545 THR ASN MET VAL TYR HIS GLY ASN GLN VAL ALA LEU THR SEQRES 35 C 545 TYR GLU ILE PRO MET ALA GLU VAL VAL LEU ASP PHE PHE SEQRES 36 C 545 ASP ARG LEU LYS SER THR SER ARG GLY TYR ALA SER LEU SEQRES 37 C 545 ASP TYR ASN PHE LYS ARG PHE GLN ALA SER ASP MET VAL SEQRES 38 C 545 ARG VAL ASP VAL LEU ILE ASN GLY GLU ARG VAL ASP ALA SEQRES 39 C 545 LEU ALA LEU ILE THR HIS ARG ASP ASN SER GLN ASN ARG SEQRES 40 C 545 GLY ARG GLU LEU VAL GLU LYS MET LYS ASP LEU ILE PRO SEQRES 41 C 545 ARG GLN GLN PHE ASP ILE ALA ILE GLN ALA ALA ILE GLY SEQRES 42 C 545 THR HIS ILE ILE ALA ARG SER THR VAL LYS GLN LEU SEQRES 1 D 123 ALA THR VAL ASN GLN LEU VAL ARG LYS PRO ARG ALA ARG SEQRES 2 D 123 LYS VAL ALA LYS SER ASN VAL PRO ALA LEU GLU ALA CYS SEQRES 3 D 123 PRO GLN LYS ARG GLY VAL CYS THR ARG VAL TYR THR THR SEQRES 4 D 123 THR PRO LYS LYS PRO ASN SER ALA LEU ARG LYS VAL CYS SEQRES 5 D 123 ARG VAL ARG LEU THR ASN GLY PHE GLU VAL THR SER TYR SEQRES 6 D 123 ILE GLY GLY GLU GLY HIS ASN LEU GLN GLU HIS SER VAL SEQRES 7 D 123 ILE LEU ILE ARG GLY GLY ARG VAL LYS ASP LEU PRO GLY SEQRES 8 D 123 VAL ARG TYR HIS THR VAL ARG GLY ALA LEU ASP CYS SER SEQRES 9 D 123 GLY VAL LYS ASP ARG LYS GLN ALA ARG SER LYS TYR GLY SEQRES 10 D 123 VAL LYS ARG PRO LYS ALA SEQRES 1 H 141 ALA LYS LYS VAL GLN ALA TYR VAL LYS LEU GLN VAL ALA SEQRES 2 H 141 ALA GLY MET ALA ASN PRO SER PRO PRO VAL GLY PRO ALA SEQRES 3 H 141 LEU GLY GLN GLN GLY VAL ASN ILE MET GLU PHE CYS LYS SEQRES 4 H 141 ALA PHE ASN ALA LYS THR ASP SER ILE GLU LYS GLY LEU SEQRES 5 H 141 PRO ILE PRO VAL VAL ILE THR VAL TYR ALA ASP ARG SER SEQRES 6 H 141 PHE THR PHE VAL THR LYS THR PRO PRO ALA ALA VAL LEU SEQRES 7 H 141 LEU LYS LYS ALA ALA GLY ILE LYS SER GLY SER GLY LYS SEQRES 8 H 141 PRO ASN LYS ASP LYS VAL GLY LYS ILE SER ARG ALA GLN SEQRES 9 H 141 LEU GLN GLU ILE ALA GLN THR LYS ALA ALA ASP MET THR SEQRES 10 H 141 GLY ALA ASP ILE GLU ALA MET THR ARG SER ILE GLU GLY SEQRES 11 H 141 THR ALA ARG SER MET GLY LEU VAL VAL GLU ASP MODRES 3DEG 2MG A 10 G 2N-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3DEG H2U A 16 U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE MODRES 3DEG H2U A 17 U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE MODRES 3DEG M2G A 26 G N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3DEG OMC A 32 C O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE MODRES 3DEG OMG A 34 G O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE MODRES 3DEG YG A 37 G WYBUTOSINE MODRES 3DEG PSU A 39 U PSEUDOURIDINE-5'-MONOPHOSPHATE MODRES 3DEG 5MC A 40 C 5-METHYLCYTIDINE-5'-MONOPHOSPHATE MODRES 3DEG 7MG A 46 G MODRES 3DEG 5MC A 49 C 5-METHYLCYTIDINE-5'-MONOPHOSPHATE MODRES 3DEG 5MU A 54 U 5-METHYLURIDINE 5'-MONOPHOSPHATE MODRES 3DEG PSU A 55 U PSEUDOURIDINE-5'-MONOPHOSPHATE MODRES 3DEG 1MA A 58 A MODRES 3DEG 5MU B 54 U 5-METHYLURIDINE 5'-MONOPHOSPHATE HET 2MG A 10 24 HET H2U A 16 20 HET H2U A 17 20 HET M2G A 26 25 HET OMC A 32 21 HET OMG A 34 24 HET YG A 37 39 HET PSU A 39 20 HET 5MC A 40 21 HET 7MG A 46 24 HET 5MC A 49 21 HET 5MU A 54 21 HET PSU A 55 20 HET 1MA A 58 23 HET 5MU B 54 21 HETNAM 2MG 2N-METHYLGUANOSINE-5'-MONOPHOSPHATE HETNAM H2U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE HETNAM M2G N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE HETNAM OMC O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE HETNAM OMG O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE HETNAM YG WYBUTOSINE HETNAM PSU PSEUDOURIDINE-5'-MONOPHOSPHATE HETNAM 5MC 5-METHYLCYTIDINE-5'-MONOPHOSPHATE HETNAM 7MG 7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE HETNAM 5MU 5-METHYLURIDINE 5'-MONOPHOSPHATE HETNAM 1MA 6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE HETSYN YG Y-BASE; 1H-IMIDAZO(1,2-ALPHA)PURINE-7-BUTANOIC ACID,4, HETSYN 2 YG 9-DIHYDRO-ALPHA-((METHOXYCARBONYL)AMINO)-4,6-DIMETHYL- HETSYN 3 YG 9-OXO-METHYL ESTER FORMUL 1 2MG C11 H16 N5 O8 P FORMUL 1 H2U 2(C9 H15 N2 O9 P) FORMUL 1 M2G C12 H18 N5 O8 P FORMUL 1 OMC C10 H16 N3 O8 P FORMUL 1 OMG C11 H16 N5 O8 P FORMUL 1 YG C21 H29 N6 O12 P FORMUL 1 PSU 2(C9 H13 N2 O9 P) FORMUL 1 5MC 2(C10 H16 N3 O8 P) FORMUL 1 7MG C11 H18 N5 O8 P FORMUL 1 5MU 2(C10 H15 N2 O9 P) FORMUL 1 1MA C11 H16 N5 O7 P HELIX 1 1 SER C 18 CYS C 28 1 11 HELIX 2 2 MET C 44 GLY C 51 1 8 HELIX 3 3 PHE C 84 ALA C 93 1 10 HELIX 4 4 ALA C 110 MET C 122 1 13 HELIX 5 5 ASP C 139 ILE C 150 1 12 HELIX 6 6 GLY C 168 ILE C 180 1 13 HELIX 7 7 SER C 303 ASP C 305 5 3 HELIX 8 8 ASP C 306 LEU C 319 1 14 HELIX 9 9 GLY C 344 GLU C 358 1 15 HELIX 10 10 SER C 386 LEU C 390 5 5 HELIX 11 11 ALA C 392 ASN C 394 5 3 HELIX 12 12 TYR C 414 LYS C 425 1 12 HELIX 13 13 MET C 447 LEU C 452 1 6 HELIX 14 14 PHE C 454 SER C 462 1 9 HELIX 15 15 VAL C 492 ALA C 496 5 5 HELIX 16 16 ASN C 503 ILE C 519 1 17 HELIX 17 17 THR D 2 LYS D 9 1 8 HELIX 18 18 GLY H 24 GLN H 29 1 6 HELIX 19 19 ASN H 33 GLU H 49 1 17 HELIX 20 20 ALA H 75 GLY H 84 1 10 HELIX 21 21 ARG H 102 LYS H 112 1 11 HELIX 22 22 ALA H 113 ASP H 115 5 3 HELIX 23 23 ASP H 120 MET H 135 1 16 SHEET 1 A 6 VAL C 59 LYS C 64 0 SHEET 2 A 6 THR C 70 ASP C 77 -1 O LEU C 73 N LEU C 61 SHEET 3 A 6 ILE C 4 ILE C 10 1 N ARG C 5 O GLN C 72 SHEET 4 A 6 GLY C 97 ASP C 103 1 O LEU C 99 N ILE C 10 SHEET 5 A 6 GLU C 125 ASN C 131 1 O GLU C 125 N ALA C 98 SHEET 6 A 6 VAL C 159 ARG C 160 1 O VAL C 159 N LEU C 130 SHEET 1 B 8 THR C 231 ASN C 233 0 SHEET 2 B 8 LYS C 222 VAL C 225 -1 N VAL C 223 O TYR C 232 SHEET 3 B 8 THR C 273 LEU C 276 -1 O THR C 275 N LYS C 224 SHEET 4 B 8 GLN C 192 ASP C 201 -1 N ALA C 193 O LEU C 274 SHEET 5 B 8 GLY C 205 ASN C 214 -1 O LYS C 213 N GLN C 192 SHEET 6 B 8 VAL C 255 VAL C 259 -1 O GLY C 256 N ILE C 210 SHEET 7 B 8 ARG C 236 PHE C 240 -1 N ARG C 236 O VAL C 259 SHEET 8 B 8 GLN C 244 ASP C 246 -1 O VAL C 245 N ILE C 239 SHEET 1 C 2 LEU C 217 ARG C 218 0 SHEET 2 C 2 GLU C 249 LEU C 250 -1 O LEU C 250 N LEU C 217 SHEET 1 D 4 PHE C 325 SER C 331 0 SHEET 2 D 4 GLY C 335 PHE C 342 -1 O GLY C 341 N PHE C 325 SHEET 3 D 4 VAL C 295 PRO C 301 -1 N VAL C 295 O PHE C 342 SHEET 4 D 4 LEU C 363 THR C 365 -1 O ILE C 364 N PHE C 300 SHEET 1 E 5 VAL C 381 VAL C 384 0 SHEET 2 E 5 TYR C 372 THR C 376 -1 N VAL C 374 O ILE C 382 SHEET 3 E 5 ILE C 396 PRO C 411 -1 O GLU C 398 N GLU C 375 SHEET 4 E 5 GLN C 438 PRO C 446 -1 O LEU C 441 N MET C 408 SHEET 5 E 5 VAL C 428 HIS C 435 -1 N VAL C 433 O ALA C 440 SHEET 1 F 4 VAL C 381 VAL C 384 0 SHEET 2 F 4 TYR C 372 THR C 376 -1 N VAL C 374 O ILE C 382 SHEET 3 F 4 ILE C 396 PRO C 411 -1 O GLU C 398 N GLU C 375 SHEET 4 F 4 SER C 467 ALA C 477 -1 O ARG C 474 N ILE C 403 SHEET 1 G 4 LEU C 497 HIS C 500 0 SHEET 2 G 4 MET C 480 ILE C 487 -1 N VAL C 481 O THR C 499 SHEET 3 G 4 ILE C 526 ILE C 532 -1 O ALA C 531 N ASP C 484 SHEET 4 G 4 HIS C 535 VAL C 542 -1 O SER C 540 N ILE C 528 SHEET 1 H 5 ARG D 35 TYR D 37 0 SHEET 2 H 5 VAL D 51 VAL D 54 -1 O ARG D 53 N ARG D 35 SHEET 3 H 5 VAL D 62 TYR D 65 -1 O SER D 64 N CYS D 52 SHEET 4 H 5 TYR D 94 THR D 96 1 O THR D 96 N TYR D 65 SHEET 5 H 5 ILE D 81 GLY D 83 -1 N ARG D 82 O HIS D 95 SHEET 1 I 3 VAL H 8 VAL H 12 0 SHEET 2 I 3 ILE H 54 VAL H 60 -1 O VAL H 56 N LEU H 10 SHEET 3 I 3 PHE H 66 THR H 70 -1 O THR H 67 N THR H 59 SHEET 1 J 2 GLY H 98 SER H 101 0 SHEET 2 J 2 LEU H 137 GLU H 140 1 O VAL H 138 N ILE H 100 LINK O3' A A 9 P 2MG A 10 1555 1555 1.63 LINK O3' 2MG A 10 P C A 11 1555 1555 1.60 LINK O3' G A 15 P H2U A 16 1555 1555 1.61 LINK O3' H2U A 16 P H2U A 17 1555 1555 1.62 LINK O3' H2U A 17 P G A 18 1555 1555 1.60 LINK O3' C A 25 P M2G A 26 1555 1555 1.45 LINK O3' M2G A 26 P C A 27 1555 1555 1.60 LINK O3' A A 31 P OMC A 32 1555 1555 1.61 LINK O3' OMC A 32 P U A 33 1555 1555 1.61 LINK O3' OMG A 34 P A A 35 1555 1555 1.84 LINK O3' A A 36 P YG A 37 1555 1555 1.64 LINK O3' YG A 37 P A A 38 1555 1555 1.60 LINK O3' A A 38 P PSU A 39 1555 1555 1.61 LINK O3' PSU A 39 P 5MC A 40 1555 1555 1.61 LINK O3' 5MC A 40 P U A 41 1555 1555 1.60 LINK O3' G A 45 P 7MG A 46 1555 1555 1.60 LINK O3' 7MG A 46 P U A 47 1555 1555 1.63 LINK O3' C A 48 P 5MC A 49 1555 1555 1.60 LINK O3' 5MC A 49 P U A 50 1555 1555 1.61 LINK O3' G A 53 P 5MU A 54 1555 1555 1.64 LINK O3' 5MU A 54 P PSU A 55 1555 1555 1.62 LINK O3' PSU A 55 P C A 56 1555 1555 1.61 LINK O3' G A 57 P 1MA A 58 1555 1555 1.58 LINK O3' 1MA A 58 P U A 59 1555 1555 1.64 LINK O3' G B 53 P 5MU B 54 1555 1555 1.60 LINK O3' 5MU B 54 P U B 55 1555 1555 1.61 CISPEP 1 GLY C 30 LEU C 31 0 -11.36 CISPEP 2 THR C 241 PRO C 242 0 7.99 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000