2R1Z Antitumor Protein date Aug 23, 2007
title Crystal Structure Of The Bard1 Brct Repeat
authors M.S.Lee, R.A.Edwards, R.S.Williams, M.J.N.Glover
compound source
Molecule: Brca1-Associated Ring Domain Protein 1
Chain: A, B
Synonym: Bard-1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bard1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest15
symmetry Space Group: P 21 21 21
R_factor 0.222 R_Free 0.262
length a length b length c angle alpha angle beta angle gamma
56.821 75.550 117.967 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand GOL enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (2r1z.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (2r1z.pdb2.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 2R1Z
  • CSU: Contacts of Structural Units for 2R1Z
  • Likely Quarternary Molecular Structure file(s) for 2R1Z
  • Structure Factors (327 Kb)
  • Retrieve 2R1Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R1Z from S2C, [Save to disk]
  • Re-refined 2r1z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2R1Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2R1Z
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2R1Z, from MSDmotif at EBI
  • Fold representative 2r1z from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r1z] [2r1z_B] [2r1z_A]
  • SWISS-PROT database: [Q99728]
  • Domain organization of [BARD1_HUMAN] by SWISSPFAM
  • Domain found in 2R1Z: [BRCT ] by SMART
  • Other resources with information on 2R1Z
  • Community annotation for 2R1Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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