5HKE Hydrolase date Jan 14, 2016
title Bile Salt Hydrolase From Lactobacillus Salivarius
authors X.J.Hu
compound source
Molecule: Bile Salt Hydrolase
Chain: A, B
Engineered: Yes
Organism_scientific: Lactobacillus Salivarius
Organism_taxid: 1624
Cell_line: Nrrl B-30514
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
symmetry Space Group: P 21 21 2
R_factor 0.152 R_Free 0.185
length a length b length c angle alpha angle beta angle gamma
90.790 87.356 86.766 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand OCS, PO4 enzyme Hydrolase E.C. BRENDA
A, B

Primary referenceCrystal structure of bile salt hydrolase from Lactobacillus salivarius., Xu F, Guo F, Hu XJ, Lin J, Acta Crystallogr F Struct Biol Commun. 2016 May;72(Pt 5):376-81. doi:, 10.1107/S2053230X16005707. Epub 2016 Apr 22. PMID:27139829
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (5hke.pdb1.gz) 112 Kb
  • Biological Unit Coordinates (5hke.pdb2.gz) 222 Kb
  • LPC: Ligand-Protein Contacts for 5HKE
  • CSU: Contacts of Structural Units for 5HKE
  • Structure Factors (1158 Kb)
  • Retrieve 5HKE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HKE from S2C, [Save to disk]
  • Re-refined 5hke structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HKE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HKE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 5hke from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hke_A] [5hke] [5hke_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5HKE
  • Community annotation for 5HKE at PDBWiki (http://pdbwiki.org)

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