6FDF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, SAH	enzyme
Gene Ontology	Chain Function Process Component B, C, A, D tRNA (cytosine) methyltransf...
Primary reference	Structural insights into the stimulation of S. pombe Dnmt2 catalytic efficiency by the tRNA nucleoside queuosine., Johannsson S, Neumann P, Wulf A, Welp LM, Gerber HD, Krull M, Diederichsen U, Urlaub H, Ficner R, Sci Rep. 2018 Jun 11;8(1):8880. doi: 10.1038/s41598-018-27118-5. PMID:29892076

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (459 Kb) [Save to disk] Biological Unit Coordinates (6fdf.pdb1.gz) 119 Kb Biological Unit Coordinates (6fdf.pdb2.gz) 117 Kb Biological Unit Coordinates (6fdf.pdb3.gz) 115 Kb Biological Unit Coordinates (6fdf.pdb4.gz) 114 Kb LPC: Ligand-Protein Contacts for 6FDF CSU: Contacts of Structural Units for 6FDF Structure Factors (1415 Kb) Retrieve 6FDF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6FDF from S2C, [Save to disk]

View 6FDF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6fdf_A] [6fdf_B] [6fdf_C] [6fdf_D] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---