1BEY Antibody date May 18, 1998
title Antibody To Campath-1h Humanized Fab
authors G.M.T.Cheetham, G.Hale, H.Waldmann, A.C.Bloomer
compound source
Molecule: Campath-1h Antibody
Chain: L
Fragment: Fab Fragment
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Hybridoma Culture Supernatant

Molecule: Campath-1h Antibody
Chain: H
Fragment: Fab Fragment

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Hybridoma Culture Supernatant
symmetry Space Group: P 65 2 2
R_factor 0.214 R_Free 0.306
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.060 80.060 347.250 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.25 Å
Gene
Ontology
ChainFunctionProcessComponent
L


Primary referenceCrystal structures of a rat anti-CD52 (CAMPATH-1) therapeutic antibody Fab fragment and its humanized counterpart., Cheetham GM, Hale G, Waldmann H, Bloomer AC, J Mol Biol 1998 Nov 20;284(1):85-99. PMID:9811544
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (1bey.pdb1.gz) 62 Kb
  • CSU: Contacts of Structural Units for 1BEY
  • Likely Quarternary Molecular Structure file(s) for 1BEY
  • Retrieve 1BEY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BEY from S2C, [Save to disk]
  • View 1BEY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1BEY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1BEY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1beyh1, region H:1-121 [Jmol] [rasmolscript] [script source]
        - Domain d1beyh2, region H:122-219 [Jmol] [rasmolscript] [script source]
        - Domain d1beyl1, region L:1-107 [Jmol] [rasmolscript] [script source]
        - Domain d1beyl2, region L:108-214 [Jmol] [rasmolscript] [script source]
  • Fold representative 1bey from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bey_H] [1bey] [1bey_L]
  • SWISS-PROT database: [P01857]
  • Domain organization of [IGHG1_HUMAN] by SWISSPFAM
  • Domains found in 1BEY: [IG_like] [IGv ] by SMART
  • Other resources with information on 1BEY
  • Community annotation for 1BEY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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