1D6E date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACE, ALC, MPQ, NH2, TBG enzyme
related structures by homologous chain: 1AQD, 1D5X, 1SJE
Gene
Ontology
ChainFunctionProcessComponent
A


B


C
  • toxin activity


    • Primary referencePeptide and peptide mimetic inhibitors of antigen presentation by HLA-DR class II MHC molecules. Design, structure-activity relationships, and X-ray crystal structures., Bolin DR, Swain AL, Sarabu R, Berthel SJ, Gillespie P, Huby NJ, Makofske R, Orzechowski L, Perrotta A, Toth K, Cooper JP, Jiang N, Falcioni F, Campbell R, Cox D, Gaizband D, Belunis CJ, Vidovic D, Ito K, Crowther R, Kammlott U, Zhang X, Palermo R, Weber D, Guenot J, Nagy Z, Olson GL, J Med Chem 2000 Jun 1;43(11):2135-48. PMID:10841792
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (1d6e.pdb1.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 1D6E
  • CSU: Contacts of Structural Units for 1D6E
  • Likely Quarternary Molecular Structure file(s) for 1D6E
  • Structure Factors (297 Kb)
  • Retrieve 1D6E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D6E from S2C, [Save to disk]
  • Re-refined 1d6e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1D6E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d6e] [1d6e_A] [1d6e_B] [1d6e_C] [1d6e_D]
  • SWISS-PROT database: [P13760] [P01903] [P01552]
  • Domains found in 1D6E: [IGc1] [MHC_II_alpha] [MHC_II_beta ] by SMART

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