1DBX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
related structures by homologous chain: 1DBU
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • aminoacyl-tRNA editing activ...
  • Ala-tRNA(Pro) hydrolase acti...


  • Primary referenceCrystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications., Zhang H, Huang K, Li Z, Banerjei L, Fisher KE, Grishin NV, Eisenstein E, Herzberg O, Proteins 2000 Jul 1;40(1):86-97. PMID:10813833
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1dbx.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (1dbx.pdb2.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 1DBX
  • CSU: Contacts of Structural Units for 1DBX
  • Likely Quarternary Molecular Structure file(s) for 1DBX
  • Retrieve 1DBX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DBX from S2C, [Save to disk]
  • View 1DBX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dbx] [1dbx_A] [1dbx_B]
  • SWISS-PROT database: [P45202]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science