1DK1		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	K, MG, MSE, NA	enzyme
note	1DK1 is a representative structure
related structures	by homologous chain: 1F7Y, 1G1X
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the S15-rRNA complex., Nikulin A, Serganov A, Ennifar E, Tishchenko S, Nevskaya N, Shepard W, Portier C, Garber M, Ehresmann B, Ehresmann C, Nikonov S, Dumas P, Nat Struct Biol 2000 Apr;7(4):273-7. PMID:10742169

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (1dk1.pdb1.gz) 42 Kb LPC: Ligand-Protein Contacts for 1DK1 CSU: Contacts of Structural Units for 1DK1 Likely Quarternary Molecular Structure file(s) for 1DK1 Retrieve 1DK1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DK1 from S2C, [Save to disk]

View 1DK1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1dk1] [1dk1_A] [1dk1_B] SWISS-PROT database: [P80378] Domain found in 1DK1: [Ribosomal_S15 ] by SMART

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