1E3G Androgen Receptor date Jun 14, 2000
title Human Androgen Receptor Ligand Binding In Complex With The L Metribolone (R1881)
authors P.M.Matias, P.Donner, R.Coelho, M.Thomaz, C.Peixoto, S.Macedo, N.O S.Joschko, P.Scholz, A.Wegg, S.Basler, M.Schafer, M.Ruff, U.Egner M.A.Carrondo
compound source
Molecule: Androgen Receptor
Chain: A
Fragment: Ligand-Binding Domain Residues 447-709
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 21 21 21
R_factor 0.210 R_Free 0.297
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.280 66.140 71.720 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand R18 BindingDB enzyme
related structures by homologous chain: 1T5Z, 1XJ7
Primary referenceStructural evidence for ligand specificity in the binding domain of the human androgen receptor. Implications for pathogenic gene mutations., Matias PM, Donner P, Coelho R, Thomaz M, Peixoto C, Macedo S, Otto N, Joschko S, Scholz P, Wegg A, Basler S, Schafer M, Egner U, Carrondo MA, J Biol Chem 2000 Aug 25;275(34):26164-71. PMID:10840043
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (1e3g.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 1E3G
  • CSU: Contacts of Structural Units for 1E3G
  • Likely Quarternary Molecular Structure file(s) for 1E3G
  • Structure Factors (71 Kb)
  • Retrieve 1E3G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E3G from S2C, [Save to disk]
  • Re-refined 1e3g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1E3G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E3G
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1E3G, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e3ga_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1e3g from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e3g] [1e3g_A]
  • SWISS-PROT database: [P10275]
  • Domain organization of [ANDR_HUMAN] by SWISSPFAM
  • Domain found in 1E3G: [HOLI ] by SMART
  • Other resources with information on 1E3G
  • Community annotation for 1E3G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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