1FDS Dehydrogenase date Jun 28, 1996
title Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed Beta-Estradiol
authors D.Housset, R.Breton, C.Mazza, J.C.Fontecilla-Camps
compound source
Molecule: 17-Beta-Hydroxysteroid-Dehydrogenase
Chain: A
Ec: 1.1.1.62
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: C 1 2 1
R_factor 0.178 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
122.330 44.840 60.960 90.00 98.84 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand EST enzyme Oxidoreductase E.C.1.1.1.62 BRENDA
related structures by homologous chain: 1QYV, 1QYW
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of a complex of human 17beta-hydroxysteroid dehydrogenase with estradiol and NADP+ identifies two principal targets for the design of inhibitors., Breton R, Housset D, Mazza C, Fontecilla-Camps JC, Structure 1996 Aug 15;4(8):905-15. PMID:8805577
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (1fds.pdb1.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 1FDS
  • CSU: Contacts of Structural Units for 1FDS
  • Likely Quarternary Molecular Structure file(s) for 1FDS
  • Retrieve 1FDS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FDS from S2C, [Save to disk]
  • View 1FDS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FDS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1FDS, from MSDmotif at EBI
  • Genome occurence of 1FDS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fds__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1fds from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fds_A] [1fds]
  • SWISS-PROT database: [P14061]
  • Domain organization of [DHB1_HUMAN] by SWISSPFAM
  • Other resources with information on 1FDS
  • Community annotation for 1FDS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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