1GDX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NA enzyme
related structures by homologous chain: 1IP3, 2BQH
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRole of non-glycine residues in left-handed helical conformation for the conformational stability of human lysozyme., Takano K, Yamagata Y, Yutani K, Proteins 2001 Aug 15;44(3):233-43. PMID:11455596
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (1gdx.pdb1.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 1GDX
  • CSU: Contacts of Structural Units for 1GDX
  • Likely Quarternary Molecular Structure file(s) for 1GDX
  • Retrieve 1GDX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GDX from S2C, [Save to disk]
  • View 1GDX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gdx] [1gdx_A]
  • SWISS-PROT database: [P61626]
  • Domain found in 1GDX: [LYZ1 ] by SMART

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