1GGZ Metal Binding Protein date Oct 13, 2000
title Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Epithelial Cells
authors B.G.Han, M.Han, H.Sui, P.Yaswen, P.J.Walian, B.K.Jap
compound source
Molecule: Calmodulin-Related Protein Nb-1
Chain: A
Synonym: Calmodulin-Like Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell: Epithelial
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-11d
symmetry Space Group: P 21 21 2
R_factor 0.183 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.380 93.630 24.860 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand CA enzyme
related structures by homologous chain: 1EXR, 1G4Y
Gene
Ontology
ChainFunctionProcessComponent
A
  • enzyme regulator activity


    • Primary referenceCrystal structure of human calmodulin-like protein: insights into its functional role., Han BG, Han M, Sui H, Yaswen P, Walian PJ, Jap BK, FEBS Lett 2002 Jun 19;521(1-3):24-30. PMID:12067719
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (1ggz.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 1GGZ
  • CSU: Contacts of Structural Units for 1GGZ
  • Likely Quarternary Molecular Structure file(s) for 1GGZ
  • Retrieve 1GGZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GGZ from S2C, [Save to disk]
    • View 1GGZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GGZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1GGZ from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GGZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ggza_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ggz] [1ggz_A]
  • SWISS-PROT database: [P27482]
  • Domain organization of [CALL3_HUMAN] by SWISSPFAM
  • Domain found in 1GGZ: [EFh ] by SMART
    • Other resources with information on 1GGZ
  • Community annotation for 1GGZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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