1KDN		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ADP, AF3, MG	enzyme
related structures	by homologous chain: 1F6T, 1NUE
Gene Ontology	Chain Function Process Component C, A, B
Primary reference	AlF3 mimics the transition state of protein phosphorylation in the crystal structure of nucleoside diphosphate kinase and MgADP., Xu YW, Morera S, Janin J, Cherfils J, Proc Natl Acad Sci U S A 1997 Apr 15;94(8):3579-83. PMID:9108019

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (1kdn.pdb1.gz) 152 Kb LPC: Ligand-Protein Contacts for 1KDN CSU: Contacts of Structural Units for 1KDN Likely Quarternary Molecular Structure file(s) for 1KDN Structure Factors (223 Kb) Retrieve 1KDN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1KDN from S2C, [Save to disk] Re-refined 1kdn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1KDN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1kdn] [1kdn_A] [1kdn_B] [1kdn_C] SWISS-PROT database: [P22887] Domain found in 1KDN: [NDK ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---