1L0B Unknown Function date Feb 08, 2002
title Crystal Structure Of Rat Brca1 Tandem-Brct Region
authors W.S.Joo, P.D.Jeffrey, S.B.Cantor, M.S.Finnin, D.M.Livingston, N.P.Pavletich
compound source
Molecule: Brca1
Chain: A
Fragment: Tandem-Brct Region
Engineered: Yes
 Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: C 1 2 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.512 58.722 65.327 90.00 111.28 90.00
method X-Ray Diffractionresolution 2.30 Å
related structures by homologous chain: 1T15, 1T29
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the 53BP1 BRCT region bound to p53 and its comparison to the Brca1 BRCT structure., Joo WS, Jeffrey PD, Cantor SB, Finnin MS, Livingston DM, Pavletich NP, Genes Dev 2002 Mar 1;16(5):583-93. PMID:11877378
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1l0b.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 1L0B
  • Likely Quarternary Molecular Structure file(s) for 1L0B
  • Retrieve 1L0B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1L0B from S2C, [Save to disk]
    • View 1L0B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1L0B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1L0B, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1l0ba1, region A:1591-1702 [Jmol] [rasmolscript] [script source]
        - Domain d1l0ba2, region A:1705-1801 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1l0b_A] [1l0b]
  • SWISS-PROT database: [O54952]
  • Domain organization of [BRCA1_RAT] by SWISSPFAM
  • Domain found in 1L0B: [BRCT ] by SMART
    • Other resources with information on 1L0B
  • Community annotation for 1L0B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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