1MUF	Transferase	date	Sep 23, 2002
title	Structure Of Histone H3 K4-Specific Methyltransferase Set79
authors	S.A.Jacobs, J.M.Harp, S.Devarakonda, Y.Kim, F.Rastinejad, S.Khora
compound		source
Molecule: Set9 Chain: A Synonym: Histone H3 Lysine 4 Specific Methyltransferase, Se Ec: 2.1.1.43 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex
symmetry	Space Group: P 64 2 2	R_factor 0.229 R_Free 0.249
crystal cell	length a length b length c angle alpha angle beta angle gamma 110.973 110.973 96.050 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.26 Å
ligand	MSE	enzyme	Transferase E.C.2.1.1.43 BRENDA
related structures	by homologous chain: 1MT6, 1N6C
Gene Ontology	Chain Function Process Component A
Primary reference	The active site of the SET domain is constructed on a knot., Jacobs SA, Harp JM, Devarakonda S, Kim Y, Rastinejad F, Khorasanizadeh S, Nat Struct Biol 2002 Nov;9(11):833-8. PMID:12389038

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (1muf.pdb1.gz) 45 Kb LPC: Ligand-Protein Contacts for 1MUF CSU: Contacts of Structural Units for 1MUF Likely Quarternary Molecular Structure file(s) for 1MUF Structure Factors (139 Kb) Retrieve 1MUF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MUF from S2C, [Save to disk] Re-refined 1muf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1MUF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1MUF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1MUF, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1mufa2, region A:194-337 [Jmol] [rasmolscript] [script source]     - Domain d1mufa1, region A:81-193 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1muf] [1muf_A] SWISS-PROT database: [Q8WTS6] Domain organization of [SETD7_HUMAN] by SWISSPFAM Domain found in 1MUF: [SET ] by SMART

Other resources with information on 1MUF

Community annotation for 1MUF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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