1NDC date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, TYD enzyme
related structures by homologous chain: 1NUE, 1S5Z
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray structure of nucleoside diphosphate kinase complexed with thymidine diphosphate and Mg2+ at 2-A resolution., Cherfils J, Morera S, Lascu I, Veron M, Janin J, Biochemistry 1994 Aug 9;33(31):9062-9. PMID:8049207
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (1ndc.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 1NDC
  • CSU: Contacts of Structural Units for 1NDC
  • Likely Quarternary Molecular Structure file(s) for 1NDC
  • Retrieve 1NDC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NDC from S2C, [Save to disk]
  • View 1NDC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ndc] [1ndc_A]
  • SWISS-PROT database: [P22887]
  • Domain found in 1NDC: [NDK ] by SMART

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