1NMW Isomerase date Jan 12, 2003
title Solution Structure Of The Ppiase Domain Of Human Pin1
authors E.Bayer, S.Goettsch, J.W.Mueller, B.Griewel, E.Guiberman, L.Mayr,
compound source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase Nima-Interact
Chain: A
Fragment: Ppiase Domain (Residues 50-163)
Synonym: Rotamase Pin1, Ppiase Pin1
Ec: 5.2.1.8
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Pin1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
methodSolution NMR
ligand SO4 enzyme Isomerase E.C.5.2.1.8 BRENDA
related structures by homologous chain: 1F8A, 1NMV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural analysis of the mitotic regulator hPin1 in solution: insights into domain architecture and substrate binding., Bayer E, Goettsch S, Mueller JW, Griewel B, Guiberman E, Mayr LM, Bayer P, J Biol Chem 2003 Jul 11;278(28):26183-93. Epub 2003 Apr 29. PMID:12721297
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (302 Kb) [Save to disk]
  • Biological Unit Coordinates (1nmw.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 1NMW
  • CSU: Contacts of Structural Units for 1NMW
  • Original NMR restraints for 1NMW from PDB
  • Retrieve 1NMW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NMW from S2C, [Save to disk]
  • View 1NMW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NMW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1NMW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nmwa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1nmw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nmw_A] [1nmw]
  • SWISS-PROT database: [Q13526]
  • Domain organization of [PIN1_HUMAN] by SWISSPFAM
  • Other resources with information on 1NMW
  • Community annotation for 1NMW at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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