1OCO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CMO, CU, HEA, MG, NA, ZN enzyme
note 1OCO (Molecule of the Month:pdb5, pdb36)
related structures by homologous chain: 1OCC, 1OCZ
Gene
Ontology
ChainFunctionProcessComponent
B, O
  • cytochrome-c oxidase activit...


    • C, P
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


    • D, Q


    G, T


    I, V
  • cytochrome-c oxidase activit...


    • J, W


    K, X


    N, A


    R, E


    S, F


    U, H


    Y, L


    Z, M


    Primary referenceRedox-coupled crystal structural changes in bovine heart cytochrome c oxidase., Yoshikawa S, Shinzawa-Itoh K, Nakashima R, Yaono R, Yamashita E, Inoue N, Yao M, Fei MJ, Libeu CP, Mizushima T, Yamaguchi H, Tomizaki T, Tsukihara T, Science 1998 Jun 12;280(5370):1723-9. PMID:9624044
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (581 Kb) [Save to disk]
  • Biological Unit Coordinates (1oco.pdb1.gz) 571 Kb
  • LPC: Ligand-Protein Contacts for 1OCO
  • CSU: Contacts of Structural Units for 1OCO
  • Likely Quarternary Molecular Structure file(s) for 1OCO
  • Retrieve 1OCO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OCO from S2C, [Save to disk]
    • View 1OCO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oco_C] [1oco_D] [1oco_E] [1oco_F] [1oco_G] [1oco_H] [1oco_I] [1oco_J] [1oco_K] [1oco_L] [1oco_M] [1oco_N] [1oco_O] [1oco_P] [1oco_Q] [1oco_R] [1oco_S] [1oco_T] [1oco_U] [1oco_V] [1oco_W] [1oco_X] [1oco_Y] [1oco_Z] [1oco] [1oco_A] [1oco_B]
  • SWISS-PROT database: [P00396] [P68530] [P00415] [P00423] [P00426] [P00428] [P04038] [P13183] [P00430] [P10175] [P07471] [P00429] [P07470]
  • Belongs to the proton-translocating cytochrome oxidase (cox) superfamily according to TCDB.

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