1PPJ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ANY, AZI, CDL, FES, GOL, HEC, HEM, JZR, PEE, PO4, SMA enzyme
note 1PPJ is a representative structure
related structures by homologous chain: 1PP9, 2A06
Gene
Ontology
ChainFunctionProcessComponent
D, Q


E, R


G, T


H, U


I, V


J, W


N, A


O, B


P, C


S, F


Primary referenceBinding of the Respiratory Chain Inhibitor Antimycin to the Mitochondrial bc(1) Complex: A New Crystal Structure Reveals an Altered Intramolecular Hydrogen-bonding Pattern., Huang LS, Cobessi D, Tung EY, Berry EA, J Mol Biol 2005 Aug 19;351(3):573-97. PMID:16024040
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (679 Kb) [Save to disk]
  • Biological Unit Coordinates (1ppj.pdb1.gz) 663 Kb
  • LPC: Ligand-Protein Contacts for 1PPJ
  • CSU: Contacts of Structural Units for 1PPJ
  • Likely Quarternary Molecular Structure file(s) for 1PPJ
  • Structure Factors (2485 Kb)
  • Retrieve 1PPJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PPJ from S2C, [Save to disk]
  • Re-refined 1ppj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1PPJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ppj] [1ppj_A] [1ppj_B] [1ppj_C] [1ppj_D] [1ppj_E] [1ppj_F] [1ppj_G] [1ppj_H] [1ppj_I] [1ppj_J] [1ppj_N] [1ppj_O] [1ppj_P] [1ppj_Q] [1ppj_R] [1ppj_S] [1ppj_T] [1ppj_U] [1ppj_V] [1ppj_W]
  • SWISS-PROT database: [P00125] [P00157] [P31800] [P23004] [P00126] [P00129] [P13271] [P00130] [P13272]
  • Belongs to the proton-translocating quinol:cytochrome c reductase (qcr) superfamily according to TCDB.

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