1RDP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BV3, PGE, TRS	enzyme
related structures	by homologous chain: 1DJR, 1PZK
Gene Ontology	Chain Function Process Component E, D, G, H, F host cell surface binding toxin activity
Primary reference	Nonspanning bivalent ligands as improved surface receptor binding inhibitors of the cholera toxin B pentamer., Pickens JC, Mitchell DD, Liu J, Tan X, Zhang Z, Verlinde CL, Hol WG, Fan E, Chem Biol 2004 Sep;11(9):1205-15. PMID:15380181

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk] Biological Unit Coordinates (1rdp.pdb1.gz) 185 Kb LPC: Ligand-Protein Contacts for 1RDP CSU: Contacts of Structural Units for 1RDP Likely Quarternary Molecular Structure file(s) for 1RDP Structure Factors (1059 Kb) Retrieve 1RDP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1RDP from S2C, [Save to disk] Re-refined 1rdp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1RDP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rdp] [1rdp_D] [1rdp_E] [1rdp_F] [1rdp_G] [1rdp_H] SWISS-PROT database: [P01556]

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