OCA Atlas for 1T5E

1T5E

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

3GR, GOL

enzyme

related structures

by homologous chain: 1VF7

Gene
Ontology

Chain	Function	Process	Component
I, J, E, K, L, C, F, B, H, D, M, G, A	xenobiotic transmembrane tra...

Primary reference

Structure of the periplasmic component of a bacterial drug efflux pump., Higgins MK, Bokma E, Koronakis E, Hughes C, Koronakis V, Proc Natl Acad Sci U S A 2004 Jul 6;101(27):9994-9. Epub 2004 Jun 28. PMID:15226509

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (472 Kb) [Save to disk]

Biological Unit Coordinates (1t5e.pdb1.gz) 460 Kb

LPC: Ligand-Protein Contacts for 1T5E

CSU: Contacts of Structural Units for 1T5E

Likely Quarternary Molecular Structure file(s) for 1T5E

Structure Factors (1687 Kb)

Retrieve 1T5E in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1T5E from S2C, [Save to disk]

Re-refined 1t5e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1T5E in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1t5e] [1t5e_A] [1t5e_B] [1t5e_C] [1t5e_D] [1t5e_E] [1t5e_F] [1t5e_G] [1t5e_H] [1t5e_I] [1t5e_J] [1t5e_K] [1t5e_L] [1t5e_M]

SWISS-PROT database: [P52477]

Belongs to the resistance-nodulation-cell division (rnd) superfamily

according to TCDB.

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