1UPK Transferase date Oct 07, 2003
title Crystal Structure Of Mo25 In Complex With A C-Terminal Pepti Strad
authors C.C.Milburn, J.Boudeau, M.Deak, D.R.Alessi, D.M.F.Van Aalten
compound source
Molecule: Mo25 Protein
Chain: A
Synonym: Mo25 Alpha, Cgi 66
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_variant: B834
Expression_system_plasmid: Pgex6t-1

Molecule: Ste-20 Related Adaptor
Chain: B
Fragment: C-Terminal 12 Amino Acids, Residues 1-12
Synonym: Strad Alpha
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 21 21 2
R_factor 0.202 R_Free 0.230
length a length b length c angle alpha angle beta angle gamma
77.650 134.033 40.224 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand MES, MSE enzyme
related structures by homologous chain: 1UPL
  • protein serine/threonine kin...
  • positive regulation of prote...

  • Primary referenceCrystal structure of MO25 alpha in complex with the C terminus of the pseudo kinase STE20-related adaptor., Milburn CC, Boudeau J, Deak M, Alessi DR, van Aalten DM, Nat Struct Mol Biol 2004 Feb;11(2):193-200. Epub 2004 Jan 18. PMID:14730349
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (1upk.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 1UPK
  • CSU: Contacts of Structural Units for 1UPK
  • Likely Quarternary Molecular Structure file(s) for 1UPK
  • Structure Factors (258 Kb)
  • Retrieve 1UPK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UPK from S2C, [Save to disk]
  • Re-refined 1upk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UPK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UPK
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1UPK, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1upka_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1upk from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1upk_A] [1upk_B] [1upk]
  • SWISS-PROT database: [Q9Y376] [Q7RTN6]
  • Domain organization of [CAB39_HUMAN] [STRAA_HUMAN] by SWISSPFAM
  • Other resources with information on 1UPK
  • Community annotation for 1UPK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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