1VPO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand TES enzyme
related structures by homologous chain: 1AXT, 1JGL
Primary referenceCrystal structure of an in vitro affinity- and specificity-matured anti-testosterone Fab in complex with testosterone. Improved affinity results from small structural changes within the variable domains., Valjakka J, Hemminki A, Niemi S, Soderlund H, Takkinen K, Rouvinen J, J Biol Chem 2002 Nov 15;277(46):44021-7. Epub 2002 Aug 23. PMID:12196551
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (1vpo.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (1vpo.pdb2.gz) 144 Kb
  • LPC: Ligand-Protein Contacts for 1VPO
  • CSU: Contacts of Structural Units for 1VPO
  • Likely Quarternary Molecular Structure file(s) for 1VPO
  • Structure Factors (178 Kb)
  • Retrieve 1VPO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VPO from S2C, [Save to disk]
  • Re-refined 1vpo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1VPO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vpo] [1vpo_H] [1vpo_L]
  • SWISS-PROT database:
  • Domains found in 1VPO: [IG_like] [IGv ] by SMART

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