1YQK		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, GOL	enzyme
related structures	by homologous chain: 1YQL, 1YQM
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of a repair enzyme interrogating undamaged DNA elucidates recognition of damaged DNA., Banerjee A, Yang W, Karplus M, Verdine GL, Nature. 2005 Mar 31;434(7033):612-8. PMID:15800616

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (1yqk.pdb1.gz) 58 Kb LPC: Ligand-Protein Contacts for 1YQK CSU: Contacts of Structural Units for 1YQK Likely Quarternary Molecular Structure file(s) for 1YQK Structure Factors (151 Kb) Retrieve 1YQK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YQK from S2C, [Save to disk] Re-refined 1yqk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YQK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yqk] [1yqk_A] [1yqk_B] [1yqk_C] SWISS-PROT database: [O15527] Domain found in 1YQK: [ENDO3c ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---