1YRQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 2 Modelsresolution
ligand F3S, FCO, MG, NI, SF4 enzyme
related structures by homologous chain: 1YQ9, 1YQW
Gene
Ontology
ChainFunctionProcessComponent
C, G, B, A, F, D


N, J, K, H, M, I


Primary referenceStructural differences between the ready and unready oxidized states of [NiFe] hydrogenases., Volbeda A, Martin L, Cavazza C, Matho M, Faber BW, Roseboom W, Albracht SP, Garcin E, Rousset M, Fontecilla-Camps JC, J Biol Inorg Chem 2005 Apr 1;. PMID:15803334
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1514 Kb) [Save to disk]
  • Biological Unit Coordinates (1yrq.pdb1.gz) 138 Kb
  • Biological Unit Coordinates (1yrq.pdb2.gz) 137 Kb
  • Biological Unit Coordinates (1yrq.pdb3.gz) 136 Kb
  • Biological Unit Coordinates (1yrq.pdb4.gz) 139 Kb
  • Biological Unit Coordinates (1yrq.pdb5.gz) 135 Kb
  • Biological Unit Coordinates (1yrq.pdb6.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 1YRQ
  • CSU: Contacts of Structural Units for 1YRQ
  • Likely Quarternary Molecular Structure file(s) for 1YRQ
  • Structure Factors (1996 Kb)
  • Retrieve 1YRQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YRQ from S2C, [Save to disk]
    • View 1YRQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yrq] [1yrq_A] [1yrq_B] [1yrq_C] [1yrq_D] [1yrq_F] [1yrq_G] [1yrq_H] [1yrq_I] [1yrq_J] [1yrq_K] [1yrq_M] [1yrq_N]
  • SWISS-PROT database: [P18188] [P18187]

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