1YVM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CO, NA, TMG BindingDB enzyme
related structures by homologous chain: 1C24, 1XNZ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMetal Ions as Cofactors for the Binding of Inhibitors to Methionine Aminopeptidase: A Critical View of the Relevance of In Vitro Metalloenzyme Assays., Schiffmann R, Heine A, Klebe G, Klein CD, Angew Chem Int Ed Engl 2005 Jun 6;44(23):3620-3623. PMID:15880695
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (1yvm.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 1YVM
  • CSU: Contacts of Structural Units for 1YVM
  • Likely Quarternary Molecular Structure file(s) for 1YVM
  • Structure Factors (232 Kb)
  • Retrieve 1YVM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YVM from S2C, [Save to disk]
  • Re-refined 1yvm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1YVM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yvm] [1yvm_A]
  • SWISS-PROT database: [P0AE18]

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