1VQ8 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1MA, ACA, CD, CL, K, MG, NA, OMG, OMU, PSU, SPS, SR, UR3 enzyme
Gene
Ontology
ChainFunctionProcessComponent
1


2


3


A


B


C


D


E


F
  • ribonuclease P activity


    • G


    H


    I


    J


    K


    L


    M


    N


    O


    P


    Q


    R


    S


    T


    U


    V


    W


    X


    Y


    Z


    Primary referenceStructural insights into the roles of water and the 2' hydroxyl of the P site tRNA in the peptidyl transferase reaction., Schmeing TM, Huang KS, Kitchen DE, Strobel SA, Steitz TA, Mol Cell 2005 Nov 11;20(3):437-48. PMID:16285925
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1984 Kb) [Save to disk]
  • Biological Unit Coordinates (1vq8.pdb1.gz) 1939 Kb
  • LPC: Ligand-Protein Contacts for 1VQ8
  • CSU: Contacts of Structural Units for 1VQ8
  • Likely Quarternary Molecular Structure file(s) for 1VQ8
  • Structure Factors (8050 Kb)
  • Retrieve 1VQ8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VQ8 from S2C, [Save to disk]
  • Re-refined 1vq8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1VQ8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vq8] [1vq8_0] [1vq8_1] [1vq8_2] [1vq8_3] [1vq8_4] [1vq8_9] [1vq8_A] [1vq8_B] [1vq8_C] [1vq8_D] [1vq8_E] [1vq8_F] [1vq8_G] [1vq8_H] [1vq8_I] [1vq8_J] [1vq8_K] [1vq8_L] [1vq8_M] [1vq8_N] [1vq8_O] [1vq8_P] [1vq8_Q] [1vq8_R] [1vq8_S] [1vq8_T] [1vq8_U] [1vq8_V] [1vq8_W] [1vq8_X] [1vq8_Y] [1vq8_Z]
  • SWISS-PROT database: [P60617] [P14122] [P29198] [P22450] [P60618] [P12737] [P12733] [P14123] [P14119] [P12734] [P10970] [P12732] [P14116] [P10972] [P10971] [P20276] [P14121] [P18138] [P12736] [P60619] [P32410] [P22452] [P20279] [P32411] [P12735] [P14124] [P14135] [P12743] [P15825]
  • Domains found in 1VQ8: [HhH1] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L15e] [Ribosomal_L19e] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_L31e] [Ribosomal_L32e] [TRASH ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science