2EFD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component B, D
Primary reference	GDP-bound and nucleotide-free intermediates of the guanine nucleotide exchange in the Rab5.Vps9 system., Uejima T, Ihara K, Goh T, Ito E, Sunada M, Ueda T, Nakano A, Wakatsuki S, J Biol Chem. 2010 Nov 19;285(47):36689-97. Epub 2010 Sep 10. PMID:20833725

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (128 Kb) [Save to disk] Biological Unit Coordinates (2efd.pdb1.gz) 63 Kb Biological Unit Coordinates (2efd.pdb2.gz) 62 Kb CSU: Contacts of Structural Units for 2EFD Likely Quarternary Molecular Structure file(s) for 2EFD Structure Factors (469 Kb) Retrieve 2EFD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2EFD from S2C, [Save to disk] Re-refined 2efd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2EFD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2efd] [2efd_A] [2efd_B] [2efd_C] [2efd_D] SWISS-PROT database: [Q9LT31] [Q9SN68] [P31582] Domains found in 2EFD: [RAB] [VPS9 ] by SMART

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