OCA Atlas for 2G5B

2G5B

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BMA, MAN, NAG, NDG, SO4

enzyme

Primary reference

Elucidation of some Bax conformational changes through crystallization of an antibody-peptide complex., Peyerl FW, Dai S, Murphy GA, Crawford F, White J, Marrack P, Kappler JW, Cell Death Differ. 2007 Mar;14(3):447-52. Epub 2006 Sep 1. PMID:16946732

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (290 Kb) [Save to disk]

Biological Unit Coordinates (2g5b.pdb1.gz) 75 Kb

Biological Unit Coordinates (2g5b.pdb2.gz) 76 Kb

Biological Unit Coordinates (2g5b.pdb3.gz) 76 Kb

Biological Unit Coordinates (2g5b.pdb4.gz) 76 Kb

LPC: Ligand-Protein Contacts for 2G5B

CSU: Contacts of Structural Units for 2G5B

Likely Quarternary Molecular Structure file(s) for 2G5B

Structure Factors (753 Kb)

Retrieve 2G5B in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2G5B from S2C, [Save to disk]

Re-refined 2g5b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2G5B in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2g5b] [2g5b_A] [2g5b_B] [2g5b_C] [2g5b_D] [2g5b_E] [2g5b_F] [2g5b_G] [2g5b_H] [2g5b_I] [2g5b_J] [2g5b_K] [2g5b_L]

SWISS-PROT database: [Q07812] [P84751] [P01837]

Belongs to the bcl-2 (bcl-2) family

according to TCDB.

Domains found in 2G5B: [IG_like] [IGv ] by SMART

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