2HJR	Oxidoreductase	date	Jun 30, 2006
title	Crystal Structure Of Cryptosporidium Parvum Malate Dehydroge
authors	A.K.Wernimont, A.Dong, J.Lew, A.Hassani, H.Ren, W.Qiu, I.Kozieradz J.Weigelt, M.Sundstrom, A.M.Edwards, C.H.Arrowsmith, A.Bochkare M.Amani, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Malate Dehydrogenase Chain: A, B, C, D, E, F, G, H, I, J, K, L Engineered: Yes Other_details: Adjacent Gene Encodes Predicted Lactate Dehy		Organism_scientific: Cryptosporidium Parvum Organism_taxid: 5807 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 32	R_factor 0.198 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 171.887 171.887 135.606 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	APR, CIT	enzyme
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L
Primary reference	Genome-scale protein expression and structural biology of Plasmodium falciparum and related Apicomplexan organisms., Vedadi M, Lew J, Artz J, Amani M, Zhao Y, Dong A, Wasney GA, Gao M, Hills T, Brokx S, Qiu W, Sharma S, Diassiti A, Alam Z, Melone M, Mulichak A, Wernimont A, Bray J, Loppnau P, Plotnikova O, Newberry K, Sundararajan E, Houston S, Walker J, Tempel W, Bochkarev A, Kozieradzki I, Edwards A, Arrowsmith C, Roos D, Kain K, Hui R, Mol Biochem Parasitol. 2007 Jan;151(1):100-10. Epub 2006 Nov 13. PMID:17125854

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (596 Kb) [Save to disk] Biological Unit Coordinates (2hjr.pdb1.gz) 106 Kb Biological Unit Coordinates (2hjr.pdb2.gz) 105 Kb Biological Unit Coordinates (2hjr.pdb3.gz) 105 Kb Biological Unit Coordinates (2hjr.pdb4.gz) 106 Kb Biological Unit Coordinates (2hjr.pdb5.gz) 105 Kb Biological Unit Coordinates (2hjr.pdb6.gz) 106 Kb Biological Unit Coordinates (2hjr.pdb7.gz) 202 Kb Biological Unit Coordinates (2hjr.pdb8.gz) 202 Kb Biological Unit Coordinates (2hjr.pdb9.gz) 201 Kb LPC: Ligand-Protein Contacts for 2HJR CSU: Contacts of Structural Units for 2HJR Likely Quarternary Molecular Structure file(s) for 2HJR Structure Factors (3482 Kb) Retrieve 2HJR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2HJR from S2C, [Save to disk] Re-refined 2hjr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2HJR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2HJR

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2HJR, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2hjr_H] [2hjr_C] [2hjr_A] [2hjr_K] [2hjr] [2hjr_E] [2hjr_I] [2hjr_B] [2hjr_L] [2hjr_F] [2hjr_J] [2hjr_D] [2hjr_G] SWISS-PROT database: [Q5CYZ3] Domain organization of [Q5CYZ3_CRYPV] by SWISSPFAM

Other resources with information on 2HJR

Community annotation for 2HJR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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